RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 SHISA4Q96DD7 197 aa12.49□□□□□ -0.41
CHD8-205ENST00000553651 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
CHD8-205ENST00000553651 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
CHD8-205ENST00000553651 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
CHD8-205ENST00000553651 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
CHD8-205ENST00000553651 DLGAP5Q15398 846 aa12.48□□□□□ -0.41
CHD8-205ENST00000553651 OTUD7BQ6GQQ9 843 aa12.48□□□□□ -0.41
CHD8-205ENST00000553651 UBE2Q1Q7Z7E8 422 aa12.48□□□□□ -0.41
CHD8-205ENST00000553651 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
CHD8-205ENST00000553651 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
CHD8-205ENST00000553651 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 SLC4A8Q2Y0W8 1093 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 NBPF11Q86T75 865 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 ANKRD13AQ8IZ07 590 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
CHD8-205ENST00000553651 PRMT6Q96LA8 375 aaPredicted RBP12.47□□□□□ -0.41
CHD8-205ENST00000553651 CLRN2A0PK11 232 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 IREB2P48200 963 aaKnown RBP12.46□□□□□ -0.41
CHD8-205ENST00000553651 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.41
CHD8-205ENST00000553651 CCDC146Q8IYE0 955 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 SLC17A8Q8NDX2 589 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 SH3TC2Q8TF17 1288 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
CHD8-205ENST00000553651 SNAP23O00161 211 aa12.45□□□□□ -0.42
CHD8-205ENST00000553651 MYCP01106 439 aaPredicted RBP12.45□□□□□ -0.42
CHD8-205ENST00000553651 RASA3Q14644 834 aa12.45□□□□□ -0.42
CHD8-205ENST00000553651 CFAP100Q494V2 611 aa12.45□□□□□ -0.42
CHD8-205ENST00000553651 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
CHD8-205ENST00000553651 ELP3Q9H9T3 547 aa12.45□□□□□ -0.42
CHD8-205ENST00000553651 A0A1B0GUL6 1792 aa12.44□□□□□ -0.42
CHD8-205ENST00000553651 MTFR1Q15390 333 aa12.44□□□□□ -0.42
CHD8-205ENST00000553651 TAF1CQ15572 869 aaPredicted RBP12.44□□□□□ -0.42
CHD8-205ENST00000553651 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
CHD8-205ENST00000553651 TEPSINQ96N21 525 aa12.44□□□□□ -0.42
CHD8-205ENST00000553651 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
CHD8-205ENST00000553651 SOX1O00570 391 aaPredicted RBP12.43□□□□□ -0.42
CHD8-205ENST00000553651 CTGFP29279 349 aa12.43□□□□□ -0.42
CHD8-205ENST00000553651 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
CHD8-205ENST00000553651 CCL15Q16663 113 aa12.43□□□□□ -0.42
CHD8-205ENST00000553651 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
CHD8-205ENST00000553651 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
CHD8-205ENST00000553651 H7C1W4 665 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 TLR2O60603 784 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 IL1R1P14778 569 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 CASP7P55210 303 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 LACTBP83111 547 aaPredicted RBP12.42□□□□□ -0.42
CHD8-205ENST00000553651 CHRNDQ07001 517 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 VGLL4Q14135 290 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 PLA2G12BQ9BX93 195 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 ANKRD2Q9GZV1 360 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
CHD8-205ENST00000553651 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
CHD8-205ENST00000553651 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
CHD8-205ENST00000553651 CSF1RP07333 972 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 ITGA6P23229 1130 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
CHD8-205ENST00000553651 GTF2A2P52657 109 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
CHD8-205ENST00000553651 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHD8-205ENST00000553651 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
CHD8-205ENST00000553651 ZNF70Q9UC06 446 aaPredicted RBP12.41□□□□□ -0.42
CHD8-205ENST00000553651 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
CHD8-205ENST00000553651 ZBTB7BO15156 539 aaPredicted RBP12.4□□□□□ -0.42
CHD8-205ENST00000553651 MYO1BO43795 1136 aa12.4□□□□□ -0.42
CHD8-205ENST00000553651 GJA8P48165 433 aa12.4□□□□□ -0.42
CHD8-205ENST00000553651 KSR2Q6VAB6 950 aa12.4□□□□□ -0.42
CHD8-205ENST00000553651 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
CHD8-205ENST00000553651 DPF3Q92784 378 aa12.4□□□□□ -0.42
CHD8-205ENST00000553651 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 BTBD19C9JJ37 291 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 DDX58O95786 925 aaKnown RBP12.39□□□□□ -0.43
CHD8-205ENST00000553651 GNRH1P01148 92 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 PRMT2P55345 433 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 C17orf99Q6UX52 265 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 LRCH3Q96II8 777 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
CHD8-205ENST00000553651 JAG2Q9Y219 1238 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
CHD8-205ENST00000553651 ADGRA2Q96PE1 1338 aa12.38□□□□□ -0.43
CHD8-205ENST00000553651 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
CHD8-205ENST00000553651 A0A1W2PPC1 479 aa12.38□□□□□ -0.43
CHD8-205ENST00000553651 TAF5LO75529 589 aa12.38□□□□□ -0.43
CHD8-205ENST00000553651 GJB1P08034 283 aa12.38□□□□□ -0.43
CHD8-205ENST00000553651 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
CHD8-205ENST00000553651 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms