RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	DHX15	O43143	795 aa	Known RBP	5.78	□□□□□ -1.48
USP44-208	ENST00000552440		Q6ZS46	218 aa		5.78	□□□□□ -1.48
USP44-208	ENST00000552440	NSUN5	Q96P11	429 aa	Known RBP	5.78	□□□□□ -1.48
USP44-208	ENST00000552440	METTL14	Q9HCE5	456 aa	Known RBP	5.78	□□□□□ -1.48
USP44-208	ENST00000552440	PCMTD2	Q9NV79	361 aa		5.78	□□□□□ -1.48
USP44-208	ENST00000552440	RAX	Q9Y2V3	346 aa		5.78	□□□□□ -1.48
USP44-208	ENST00000552440	SETDB1	Q15047	1291 aa		5.77	□□□□□ -1.49
USP44-208	ENST00000552440	CCDC181	Q5TID7	509 aa		5.77	□□□□□ -1.49
USP44-208	ENST00000552440	TEX2	Q8IWB9	1127 aa		5.77	□□□□□ -1.49
USP44-208	ENST00000552440	KLHL23	Q8NBE8	558 aa		5.77	□□□□□ -1.49
USP44-208	ENST00000552440	GPATCH3	Q96I76	525 aa		5.77	□□□□□ -1.49
USP44-208	ENST00000552440	LNPK	Q9C0E8	428 aa		5.77	□□□□□ -1.49
USP44-208	ENST00000552440	TLDC2	A0PJX2	215 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	GLB1	P16278	677 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	PCSK2	P16519	638 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	CDC27	P30260	824 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	HELQ	Q8TDG4	1101 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	DNAJC2	Q99543	621 aa	Known RBP	5.76	□□□□□ -1.49
USP44-208	ENST00000552440	STOML1	Q9UBI4	398 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	EIF4EBP3	O60516	100 aa	Predicted RBP	5.76	□□□□□ -1.49
USP44-208	ENST00000552440	NPR3	P17342	541 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	CD68	P34810	354 aa	Predicted RBP	5.76	□□□□□ -1.49
USP44-208	ENST00000552440	GRIK1	P39086	918 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	TSNAXIP1	Q2TAA8	658 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	EAPP	Q56P03	285 aa	Predicted RBP	5.76	□□□□□ -1.49
USP44-208	ENST00000552440	PDE12	Q6L8Q7	609 aa	Known RBP	5.76	□□□□□ -1.49
USP44-208	ENST00000552440	INTS5	Q6P9B9	1019 aa	Known RBP	5.76	□□□□□ -1.49
USP44-208	ENST00000552440	ETFBKMT	Q8IXQ9	262 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	TTC16	Q8NEE8	873 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	WNT8B	Q93098	351 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	STIM2	Q9P246	746 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	USP20	Q9Y2K6	914 aa		5.76	□□□□□ -1.49
USP44-208	ENST00000552440	CABP4	P57796	275 aa		5.75	□□□□□ -1.49
USP44-208	ENST00000552440	NAA30	Q147X3	362 aa	Predicted RBP	5.75	□□□□□ -1.49
USP44-208	ENST00000552440	PMEPA1	Q969W9	287 aa		5.75	□□□□□ -1.49
USP44-208	ENST00000552440	TANGO6	Q9C0B7	1094 aa		5.75	□□□□□ -1.49
USP44-208	ENST00000552440	ABI2	Q9NYB9	513 aa	Predicted RBP	5.75	□□□□□ -1.49
USP44-208	ENST00000552440	PAX4	O43316	350 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	COBL	O75128	1261 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	PTPRA	P18433	802 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	ZAP70	P43403	619 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	EGFLAM	Q63HQ2	1017 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	CEP135	Q66GS9	1140 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5.74	□□□□□ -1.49
USP44-208	ENST00000552440	RBCK1	Q9BYM8	510 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	KLHL42	Q9P2K6	505 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	TRIM33	Q9UPN9	1127 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	FAM13A	O94988	1023 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	KIF4A	O95239	1232 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	IGLV1-40	P01703	118 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	P4HB	P07237	508 aa	Known RBP	5.74	□□□□□ -1.49
USP44-208	ENST00000552440	IGBP1	P78318	339 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	MRPL58	Q14197	206 aa	Known RBP	5.74	□□□□□ -1.49
USP44-208	ENST00000552440	HSP90AB4P	Q58FF6	505 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	SDE2	Q6IQ49	451 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	TMC7	Q7Z402	723 aa		5.74	□□□□□ -1.49
USP44-208	ENST00000552440	hCG_2014768	A0A024R1R8	64 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	SET	Q01105	290 aa	Predicted RBP	5.73	□□□□□ -1.49
USP44-208	ENST00000552440	PTPRO	Q16827	1216 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	NCAPG2	Q86XI2	1143 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	KRTAP9-2	Q9BYQ4	174 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	PBX4	Q9BYU1	374 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	BACH2	Q9BYV9	841 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	BCL11A	Q9H165	835 aa		5.73	□□□□□ -1.49
USP44-208	ENST00000552440	ALX3	O95076	343 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	TXK	P42681	527 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	ARL4D	P49703	201 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	DUOXA2	Q1HG44	320 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	MORC4	Q8TE76	937 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	KCNB2	Q92953	911 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	SAP130	Q9H0E3	1048 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	OSGEP	Q9NPF4	335 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	SEC31B	Q9NQW1	1179 aa		5.72	□□□□□ -1.49
USP44-208	ENST00000552440	LINC01387	J3KSC0	135 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	FSCN2	O14926	492 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	TREH	O43280	583 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	PIP4K2B	P78356	416 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	HDLBP	Q00341	1268 aa	Known RBP	5.71	□□□□□ -1.49
USP44-208	ENST00000552440	TRIP4	Q15650	581 aa	Predicted RBP	5.71	□□□□□ -1.49
USP44-208	ENST00000552440	CCDC144B	Q3MJ40	725 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	LDLRAD1	Q5T700	205 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	ANKRD34A	Q69YU3	496 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	ACAD11	Q709F0	780 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	GIMAP7	Q8NHV1	300 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	ADAM19	Q9H013	955 aa		5.71	□□□□□ -1.49
USP44-208	ENST00000552440	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.71	□□□□□ -1.49
USP44-208	ENST00000552440	COL17A1	Q9UMD9	1497 aa	Predicted RBP	5.71	□□□□□ -1.49
USP44-208	ENST00000552440		A0A0U1RQG5	324 aa	Predicted RBP	5.71	□□□□□ -1.5
USP44-208	ENST00000552440	TNFRSF10B	O14763	440 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	MAFG	O15525	162 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	SART1	O43290	800 aa	Known RBP	5.71	□□□□□ -1.5
USP44-208	ENST00000552440	PARN	O95453	639 aa	Known RBP	5.71	□□□□□ -1.5
USP44-208	ENST00000552440	MPST	P25325	297 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	CD97	P48960	835 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	FMR1	Q06787	632 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
USP44-208	ENST00000552440	MCTP1	Q6DN14	999 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	GPR152	Q8TDT2	470 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	UTP4	Q969X6	686 aa	Known RBP	5.71	□□□□□ -1.5
USP44-208	ENST00000552440	HIF3A	Q9Y2N7	669 aa		5.71	□□□□□ -1.5
USP44-208	ENST00000552440	TBX22	Q9Y458	520 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms