RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 PDRG1Q9NUG6 133 aa10.98□□□□□ -0.65
TMEM116-213ENST00000550831 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
TMEM116-213ENST00000550831 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
TMEM116-213ENST00000550831 HCLS1P14317 486 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-213ENST00000550831 RPS6KB1P23443 525 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 KCNJ4P48050 445 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 CLCN6P51797 869 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 APPBP2Q92624 585 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-213ENST00000550831 ZDHHC9Q9Y397 364 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-213ENST00000550831 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 CHD4Q14839 1912 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 MAST3O60307 1309 aa10.97□□□□□ -0.65
TMEM116-213ENST00000550831 UBR3Q6ZT12 1888 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
TMEM116-213ENST00000550831 SLC5A1P13866 664 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 IGHMBP2P38935 993 aaKnown RBP10.96□□□□□ -0.65
TMEM116-213ENST00000550831 MCAMP43121 646 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 SCARF1Q14162 830 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 UBE3CQ15386 1083 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 CCDC102BQ68D86 513 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 BLOC1S2Q6QNY1 142 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.65
TMEM116-213ENST00000550831 SEC62Q99442 399 aaKnown RBP10.96□□□□□ -0.65
TMEM116-213ENST00000550831 MPHOSPH8Q99549 860 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 AGXT2Q9BYV1 514 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■□□□□ 8.8
TMEM116-213ENST00000550831 STK32BQ9NY57 414 aa10.96□□□□□ -0.65
TMEM116-213ENST00000550831 RTCBQ9Y3I0 505 aaKnown RBP10.96□□□□□ -0.65
TMEM116-213ENST00000550831 LAMA4Q16363 1823 aa10.96□□□□□ -0.66
TMEM116-213ENST00000550831 GOLGA6L22H0YM25 854 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 TRAK2O60296 914 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 CYP21A2P08686 494 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
TMEM116-213ENST00000550831 ZAP70P43403 619 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 SLC15A2Q16348 729 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 TXNRD1Q16881 649 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 OSBP2Q969R2 916 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 FHDC1Q9C0D6 1143 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-213ENST00000550831 MTFR1LQ9H019 292 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 SEC31BQ9NQW1 1179 aa10.95□□□□□ -0.66
TMEM116-213ENST00000550831 BSDC1Q9NW68 430 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-213ENST00000550831 ZNF804BA4D1E1 1349 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 IGSF3O75054 1194 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 ADD2P35612 726 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 UBE4AQ14139 1066 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 TBC1D9BQ66K14 1250 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 NEK1Q96PY6 1258 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 SYT17Q9BSW7 474 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 CTNNA3Q9UI47 895 aa10.94□□□□□ -0.66
TMEM116-213ENST00000550831 PDS5AQ29RF7 1337 aaKnown RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 WDR33Q9C0J8 1336 aaKnown RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 M0R2C6 588 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 GNPATO15228 680 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 ZPR1O75312 459 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 CHGBP05060 677 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 PHKA1P46020 1223 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 TOB2Q14106 344 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 TMED8Q6PL24 325 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 CCDC129Q6ZRS4 1044 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 COL4A1P02462 1669 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 MYO5AQ9Y4I1 1855 aaKnown RBP10.93□□□□□ -0.66
TMEM116-213ENST00000550831 WDR19Q8NEZ3 1342 aa10.93□□□□□ -0.66
TMEM116-213ENST00000550831 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 FOXP2O15409 715 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 EXOSC10Q01780 885 aaKnown RBP10.92□□□□□ -0.66
TMEM116-213ENST00000550831 CHRNDQ07001 517 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 PKP1Q13835 747 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 ALX1Q15699 326 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 ME3Q16798 604 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 TPTE2Q6XPS3 522 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 ANKRD18AQ8IVF6 992 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 SPATA5Q8NB90 893 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 TPCN1Q9ULQ1 816 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 TAF6LQ9Y6J9 622 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 CARMIL3Q8ND23 1372 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 CPA1P15085 419 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 EVCP57679 992 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 C1QTNF8P60827 252 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 KLHL40Q2TBA0 621 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 TRAPPC3LQ5T215 181 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
TMEM116-213ENST00000550831 NLRP3Q96P20 1036 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 LMBRD1Q9NUN5 540 aa10.92□□□□□ -0.66
TMEM116-213ENST00000550831 SEMA3EO15041 775 aa10.91□□□□□ -0.66
TMEM116-213ENST00000550831 LARGE1O95461 756 aa10.91□□□□□ -0.66
TMEM116-213ENST00000550831 TM4SF1P30408 202 aa10.91□□□□□ -0.66
TMEM116-213ENST00000550831 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms