RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
TROAP-213ENST00000550709 FSTL1Q12841 308 aa16.98■□□□□ 0.31
TROAP-213ENST00000550709 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
TROAP-213ENST00000550709 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
TROAP-213ENST00000550709 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
TROAP-213ENST00000550709 APBB1O00213 710 aa16.97■□□□□ 0.31
TROAP-213ENST00000550709 CERS5Q8N5B7 392 aa16.97■□□□□ 0.31
TROAP-213ENST00000550709 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
TROAP-213ENST00000550709 PHKA1P46020 1223 aa16.96■□□□□ 0.31
TROAP-213ENST00000550709 KIF4BQ2VIQ3 1234 aa16.96■□□□□ 0.31
TROAP-213ENST00000550709 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
TROAP-213ENST00000550709 OGFOD1Q8N543 542 aa16.96■□□□□ 0.31
TROAP-213ENST00000550709 XAGE2Q96GT9 111 aa16.96■□□□□ 0.31
TROAP-213ENST00000550709 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.3
TROAP-213ENST00000550709 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
TROAP-213ENST00000550709 MFSD14BQ5SR56 506 aa16.95■□□□□ 0.3
TROAP-213ENST00000550709 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
TROAP-213ENST00000550709 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
TROAP-213ENST00000550709 SCN9AQ15858 1988 aa16.95■□□□□ 0.3
TROAP-213ENST00000550709 FAM205AQ6ZU69 1335 aa16.95■□□□□ 0.3
TROAP-213ENST00000550709 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
TROAP-213ENST00000550709 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
TROAP-213ENST00000550709 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
TROAP-213ENST00000550709 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
TROAP-213ENST00000550709 SCARF1Q14162 830 aa16.93■□□□□ 0.3
TROAP-213ENST00000550709 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
TROAP-213ENST00000550709 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
TROAP-213ENST00000550709 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
TROAP-213ENST00000550709 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
TROAP-213ENST00000550709 FKBP1AP62942 108 aaKnown RBP16.92■□□□□ 0.3
TROAP-213ENST00000550709 GRIK5Q16478 980 aa16.92■□□□□ 0.3
TROAP-213ENST00000550709 ERC1Q8IUD2 1116 aa16.92■□□□□ 0.3
TROAP-213ENST00000550709 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
TROAP-213ENST00000550709 IL1RAPL2Q9NP60 686 aa16.92■□□□□ 0.3
TROAP-213ENST00000550709 ZNF609O15014 1411 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 HSPA6P17066 643 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
TROAP-213ENST00000550709 IRX6P78412 446 aaPredicted RBP16.91■□□□□ 0.3
TROAP-213ENST00000550709 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
TROAP-213ENST00000550709 NBPF9Q3BBW0 867 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 ZC3H15Q8WU90 426 aaKnown RBP16.91■□□□□ 0.3
TROAP-213ENST00000550709 TBC1D22AQ8WUA7 517 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
TROAP-213ENST00000550709 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
TROAP-213ENST00000550709 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
TROAP-213ENST00000550709 TRAF5O00463 557 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
TROAP-213ENST00000550709 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 DLGAP5Q15398 846 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 AACSQ86V21 672 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 DCPSQ96C86 337 aaKnown RBP16.9■□□□□ 0.3
TROAP-213ENST00000550709 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
TROAP-213ENST00000550709 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
TROAP-213ENST00000550709 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 DENND2AQ9ULE3 1009 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 PCDHAC2Q9Y5I4 1007 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 SCN4AP35499 1836 aa16.9■□□□□ 0.3
TROAP-213ENST00000550709 A0A1B0GUL6 1792 aa16.89■□□□□ 0.3
TROAP-213ENST00000550709 HTRA3P83110 453 aa16.89■□□□□ 0.29
TROAP-213ENST00000550709 CFAP100Q494V2 611 aa16.89■□□□□ 0.29
TROAP-213ENST00000550709 ANGEL2Q5VTE6 544 aaKnown RBP16.89■□□□□ 0.29
TROAP-213ENST00000550709 DLK2Q6UY11 383 aa16.89■□□□□ 0.29
TROAP-213ENST00000550709 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
TROAP-213ENST00000550709 KIF1BPQ96EK5 621 aa16.89■□□□□ 0.29
TROAP-213ENST00000550709 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
TROAP-213ENST00000550709 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
TROAP-213ENST00000550709 WNT10BO00744 389 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 SEMA3EO15041 775 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 CCDC158Q5M9N0 1113 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
TROAP-213ENST00000550709 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
TROAP-213ENST00000550709 COL1A1P02452 1464 aaPredicted RBP16.87■□□□□ 0.29
TROAP-213ENST00000550709 ADM5C9JUS6 153 aa16.87■□□□□ 0.29
TROAP-213ENST00000550709 MMP14P50281 582 aa16.87■□□□□ 0.29
TROAP-213ENST00000550709 APLP1P51693 650 aa16.87■□□□□ 0.29
TROAP-213ENST00000550709 CDC37L1Q7L3B6 337 aa16.87■□□□□ 0.29
TROAP-213ENST00000550709 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
TROAP-213ENST00000550709 SNRKQ9NRH2 765 aa16.87■□□□□ 0.29
TROAP-213ENST00000550709 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
TROAP-213ENST00000550709 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
TROAP-213ENST00000550709 UQCRFS1P1P0C7P4 283 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 PRDX5P30044 214 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 CRKP46108 304 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 ZNF408Q9H9D4 720 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 ABCF2Q9UG63 623 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
TROAP-213ENST00000550709 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
TROAP-213ENST00000550709 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
TROAP-213ENST00000550709 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
TROAP-213ENST00000550709 IFIT2P09913 472 aaKnown RBP16.85■□□□□ 0.29
TROAP-213ENST00000550709 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
TROAP-213ENST00000550709 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms