RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 KIAA1551Q9HCM1 1747 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 MYO5AQ9Y4I1 1855 aaKnown RBP9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 MROH5Q6ZUA9 1318 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 SNAP23O00161 211 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 SDSP20132 328 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 FGFR2P21802 821 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 ADORA1P30542 326 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 TIMM10P62072 90 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 CHRNDQ07001 517 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 GRAPQ13588 217 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 PAXIP1Q6ZW49 1069 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 GRAPLQ8TC17 118 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 ECHDC1Q9NTX5 307 aa9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 BSDC1Q9NW68 430 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-207ENST00000549249 C10orf71Q711Q0 1435 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 MYH7P12883 1935 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 MYH13Q9UKX3 1938 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 PDE8BO95263 885 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 HOXA10P31260 410 aaPredicted RBP9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 RPS8P62241 208 aaKnown RBP9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 ATP2B3Q16720 1220 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 DDX46Q7L014 1031 aaKnown RBP9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 BRIP1Q9BX63 1249 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 MINPP1Q9UNW1 487 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 SLX4Q8IY92 1834 aa9.9□□□□□ -0.82
DEPDC4-207ENST00000549249 TAF5LO75529 589 aa9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 GLRX3O76003 335 aaKnown RBP9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 SRGNP10124 158 aa9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 GPR162Q16538 588 aa9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 XAGE2Q96GT9 111 aa9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 NEUROD6Q96NK8 337 aa9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 GPHNQ9NQX3 736 aaPredicted RBP9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 AKAP2Q9Y2D5 859 aa9.89□□□□□ -0.83
DEPDC4-207ENST00000549249 BRCA1P38398 1863 aaKnown RBP9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 WTIPA6NIX2 430 aaPredicted RBP9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 ERC2O15083 957 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 MAP4K4O95819 1239 aaPredicted RBP9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 ATP5JP18859 108 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 PUM3Q15397 648 aaKnown RBP9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 TBC1D9Q6ZT07 1266 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 RBM17Q96I25 401 aaKnown RBP9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 GPATCH3Q96I76 525 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 CRAMP1Q96RY5 1269 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 BOLA2Q9H3K6 86 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 DOCK2Q92608 1830 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 DUOX1Q9NRD9 1551 aa9.88□□□□□ -0.83
DEPDC4-207ENST00000549249 IRS2Q9Y4H2 1338 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 CDC45O75419 566 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 PDE6BP35913 854 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 SCARF1Q14162 830 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 LPIN2Q92539 896 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 EDC3Q96F86 508 aaKnown RBP9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 NDUFB9Q9Y6M9 179 aa9.87□□□□□ -0.83
DEPDC4-207ENST00000549249 TRIM6-TRIM34B2RNG4 842 aa9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 SLC5A1P13866 664 aa9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 NPR1P16066 1061 aa9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 PHKA1P46020 1223 aa9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 DSG2Q14126 1118 aa9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 KHSRPQ92945 711 aaKnown RBP eCLIP9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 HAUS7Q99871 368 aa9.86□□□□□ -0.83
DEPDC4-207ENST00000549249 COL1A1P02452 1464 aaPredicted RBP9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 BBOX1O75936 387 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 IFIT1P09914 478 aaKnown RBP9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 CHMLP26374 656 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 KLRK1P26718 216 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 ARID4AP29374 1257 aaPredicted RBP9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 CHRNA5P30532 468 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 MCAMP43121 646 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 FOXK1P85037 733 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 UBE4AQ14139 1066 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 TTC39AQ5SRH9 613 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 CCDC102BQ68D86 513 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 C2CD5Q86YS7 1000 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 MASTLQ96GX5 879 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 CHD4Q14839 1912 aa9.85□□□□□ -0.83
DEPDC4-207ENST00000549249 ZNF804BA4D1E1 1349 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 SNED1Q8TER0 1413 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 PPEF1O14829 653 aaPredicted RBP9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 GRIN3BO60391 1043 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 GPSM2P81274 684 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 CCDC158Q5M9N0 1113 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 GORABQ5T7V8 394 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 STYK1Q6J9G0 422 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 PI16Q6UXB8 463 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 EVI5LQ96CN4 794 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 ZNF512BQ96KM6 892 aaPredicted RBP9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 DNAJC2Q99543 621 aaKnown RBP9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 ANKRD2Q9GZV1 360 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 IL25Q9H293 177 aa9.84□□□□□ -0.83
DEPDC4-207ENST00000549249 XDHP47989 1333 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms