RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SNRPNP63162 240 aaKnown RBP6.99□□□□□ -1.29
CBX5-203ENST00000547872 SND1Q7KZF4 910 aaKnown RBP eCLIP6.99□□□□□ -1.299e-9■■■□□ 17.9
CBX5-203ENST00000547872 NCAPG2Q86XI2 1143 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 MICALL1Q8N3F8 863 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 C1orf127Q8N9H9 656 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 DMRTB1Q96MA1 342 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 RBCK1Q9BYM8 510 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 CNTN3Q9P232 1028 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 FOXD3Q9UJU5 478 aaPredicted RBP6.99□□□□□ -1.29
CBX5-203ENST00000547872 STARD13Q9Y3M8 1113 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 NCOA1Q15788 1441 aa6.99□□□□□ -1.29
CBX5-203ENST00000547872 ATP10AO60312 1499 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 NUP153P49790 1475 aaKnown RBP6.98□□□□□ -1.29
CBX5-203ENST00000547872 CDK13Q14004 1512 aaKnown RBP6.98□□□□□ -1.29
CBX5-203ENST00000547872 LILRB5O75023 590 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 PERM1Q5SV97 790 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 FAM129BQ96TA1 746 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 FRRS1LQ9P0K9 344 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 ABCA6Q8N139 1617 aa6.98□□□□□ -1.29
CBX5-203ENST00000547872 ZBTB7CA1YPR0 619 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 GNB5O14775 395 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 C20orf204Q6ZNR8 217 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 ZSCAN29Q8IWY8 852 aaPredicted RBP6.97□□□□□ -1.29
CBX5-203ENST00000547872 PLD4Q96BZ4 506 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 SMG9Q9H0W8 520 aaKnown RBP6.97□□□□□ -1.29
CBX5-203ENST00000547872 MYO5CQ9NQX4 1742 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 MYO3AQ8NEV4 1616 aa6.97□□□□□ -1.29
CBX5-203ENST00000547872 DIP2CQ9Y2E4 1556 aa6.96□□□□□ -1.29
CBX5-203ENST00000547872 PLEKHD1A6NEE1 506 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 EREGO14944 169 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 KIF4AO95239 1232 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 HOXB4P17483 251 aaPredicted RBP6.96□□□□□ -1.3
CBX5-203ENST00000547872 COL13A1Q5TAT6 717 aaPredicted RBP6.96□□□□□ -1.3
CBX5-203ENST00000547872 C8orf86Q6ZUL3 223 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 GZF1Q9H116 711 aaPredicted RBP6.96□□□□□ -1.3
CBX5-203ENST00000547872 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 AMOTL2Q9Y2J4 779 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 MAGI2Q86UL8 1455 aa6.96□□□□□ -1.3
CBX5-203ENST00000547872 SAMD9Q5K651 1589 aa6.95□□□□□ -1.3
CBX5-203ENST00000547872 GPR182O15218 404 aa6.95□□□□□ -1.3
CBX5-203ENST00000547872 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
CBX5-203ENST00000547872 LINC00114Q6XXX2 140 aa6.95□□□□□ -1.3
CBX5-203ENST00000547872 TMC7Q7Z402 723 aa6.95□□□□□ -1.3
CBX5-203ENST00000547872 PRDM6Q9NQX0 595 aa6.95□□□□□ -1.3
CBX5-203ENST00000547872 NOP53Q9NZM5 478 aaKnown RBP6.95□□□□□ -1.3
CBX5-203ENST00000547872 ARHGAP5Q13017 1502 aa6.95□□□□□ -1.3
CBX5-203ENST00000547872 KIF14Q15058 1648 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 CLTCQ00610 1675 aaKnown RBP6.94□□□□□ -1.3
CBX5-203ENST00000547872 SPDYE3A6NKU9 549 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 EDN3P14138 238 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 IRS1P35568 1242 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 AFF1P51825 1210 aaKnown RBP6.94□□□□□ -1.3
CBX5-203ENST00000547872 ORC1Q13415 861 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 TTC9Q92623 222 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 ZFYVE28Q9HCC9 887 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 SALL4Q9UJQ4 1053 aa6.94□□□□□ -1.3
CBX5-203ENST00000547872 CPNE3O75131 537 aaKnown RBP6.93□□□□□ -1.3
CBX5-203ENST00000547872 ATP11AP98196 1134 aa6.93□□□□□ -1.3
CBX5-203ENST00000547872 CEP135Q66GS9 1140 aa6.93□□□□□ -1.3
CBX5-203ENST00000547872 GDF6Q6KF10 455 aaPredicted RBP6.93□□□□□ -1.3
CBX5-203ENST00000547872 ALKBH8Q96BT7 664 aaKnown RBP6.93□□□□□ -1.3
CBX5-203ENST00000547872 ASB16Q96NS5 453 aa6.93□□□□□ -1.3
CBX5-203ENST00000547872 PLVAPQ9BX97 442 aa6.93□□□□□ -1.3
CBX5-203ENST00000547872 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
CBX5-203ENST00000547872 TRAPPC8Q9Y2L5 1435 aa6.93□□□□□ -1.3
CBX5-203ENST00000547872 CEP170BQ9Y4F5 1589 aaPredicted RBP6.92□□□□□ -1.3
CBX5-203ENST00000547872 FAM177BA6PVY3 158 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 POLR3DP05423 398 aaPredicted RBP6.92□□□□□ -1.3
CBX5-203ENST00000547872 NID1P14543 1247 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 TRAPPC3LQ5T215 181 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 AFAP1Q8N556 730 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 CEP120Q8N960 986 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 TRIM11Q96F44 468 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 PBX4Q9BYU1 374 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 ZNF142P52746 1687 aaPredicted RBP6.92□□□□□ -1.3
CBX5-203ENST00000547872 ZNF518AQ6AHZ1 1483 aa6.92□□□□□ -1.3
CBX5-203ENST00000547872 POLR1AO95602 1720 aaPredicted RBP6.91□□□□□ -1.3
CBX5-203ENST00000547872 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
CBX5-203ENST00000547872 TREHO43280 583 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 TOM1O60784 492 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 IGHA2P01877 340 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 PLCB3Q01970 1234 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 WFDC8Q8IUA0 241 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 CSRNP1Q96S65 589 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 OSMRQ99650 979 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 SUV39H2Q9H5I1 410 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 TRIM33Q9UPN9 1127 aa6.91□□□□□ -1.3
CBX5-203ENST00000547872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.91□□□□□ -1.3
CBX5-203ENST00000547872 ACPPP15309 386 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 RAC1P63000 192 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 KCNMA1Q12791 1236 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 COL9A3Q14050 684 aaPredicted RBP6.9□□□□□ -1.3
CBX5-203ENST00000547872 GRIK5Q16478 980 aa6.9□□□□□ -1.3
CBX5-203ENST00000547872 CCDC27Q2M243 656 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms