RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
BRF1-212ENST00000547562 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
BRF1-212ENST00000547562 ZSCAN25Q6NSZ9 544 aa18.25■□□□□ 0.51
BRF1-212ENST00000547562 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
BRF1-212ENST00000547562 ADD2P35612 726 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
BRF1-212ENST00000547562 MB21D2Q8IYB1 491 aaPredicted RBP18.24■□□□□ 0.51
BRF1-212ENST00000547562 BICD2Q8TD16 824 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 CLSTN2Q9H4D0 955 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 ATRNO75882 1429 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 FOSBP53539 338 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 TYRO3Q06418 890 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
BRF1-212ENST00000547562 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 SLIT2O94813 1529 aa18.24■□□□□ 0.51
BRF1-212ENST00000547562 PRC1O43663 620 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 NR1I2O75469 434 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 NCOA7Q8NI08 942 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
BRF1-212ENST00000547562 MRVI1Q9Y6F6 885 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 ZNF213O14771 459 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 SLC9C2Q5TAH2 1124 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 CKAP2LQ8IYA6 745 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 FAM200AQ8TCP9 573 aa18.23■□□□□ 0.51
BRF1-212ENST00000547562 ARID4AP29374 1257 aaPredicted RBP18.22■□□□□ 0.51
BRF1-212ENST00000547562 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
BRF1-212ENST00000547562 AK7Q96M32 723 aa18.22■□□□□ 0.51
BRF1-212ENST00000547562 PIH1D3Q9NQM4 214 aaKnown RBP18.22■□□□□ 0.51
BRF1-212ENST00000547562 MROH5Q6ZUA9 1318 aa18.22■□□□□ 0.51
BRF1-212ENST00000547562 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
BRF1-212ENST00000547562 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
BRF1-212ENST00000547562 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
BRF1-212ENST00000547562 RCOR1Q9UKL0 485 aa18.22■□□□□ 0.51
BRF1-212ENST00000547562 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 FDPSP14324 419 aaKnown RBP18.21■□□□□ 0.51
BRF1-212ENST00000547562 PHKA1P46020 1223 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 ANTXR2P58335 489 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
BRF1-212ENST00000547562 UBE3CQ15386 1083 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
BRF1-212ENST00000547562 RALYLQ86SE5 291 aaKnown RBP18.21■□□□□ 0.51
BRF1-212ENST00000547562 CDCA7Q9BWT1 371 aaPredicted RBP18.21■□□□□ 0.51
BRF1-212ENST00000547562 AP5Z1O43299 807 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 LPIN2Q92539 896 aa18.21■□□□□ 0.51
BRF1-212ENST00000547562 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
BRF1-212ENST00000547562 FGFR2P21802 821 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 ZNF396Q96N95 335 aaPredicted RBP18.2■□□□□ 0.5
BRF1-212ENST00000547562 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 KLF18A0A0U1RQI7 1052 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 DHX16O60231 1041 aaKnown RBP18.2■□□□□ 0.5
BRF1-212ENST00000547562 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
BRF1-212ENST00000547562 USP28Q96RU2 1077 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 FTOQ9C0B1 505 aaKnown RBP eCLIP18.2■□□□□ 0.5
BRF1-212ENST00000547562 HPS5Q9UPZ3 1129 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
BRF1-212ENST00000547562 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 ILDR1Q86SU0 546 aaPredicted RBP18.19■□□□□ 0.5
BRF1-212ENST00000547562 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 RREB1Q92766 1687 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 ZNF532Q9HCE3 1301 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 PDE6AP16499 860 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 ANO6Q4KMQ2 910 aa18.19■□□□□ 0.5
BRF1-212ENST00000547562 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 C4BP0C0L5 1744 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
BRF1-212ENST00000547562 DDB1Q16531 1140 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 MPNDQ8N594 471 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 HELBQ8NG08 1087 aaPredicted RBP18.18■□□□□ 0.5
BRF1-212ENST00000547562 TCRBV5S4A2TA0A5A2 114 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 TPM2P07951 284 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
BRF1-212ENST00000547562 TRDNQ13061 729 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 WWC3Q9ULE0 1092 aa18.18■□□□□ 0.5
BRF1-212ENST00000547562 THRAP3Q9Y2W1 955 aaKnown RBP18.18■□□□□ 0.5
BRF1-212ENST00000547562 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 TERF1P54274 439 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 SASS6Q6UVJ0 657 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 LUZP1Q86V48 1076 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 CHD4Q14839 1912 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 SLC5A1P13866 664 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 TBC1D10CQ8IV04 446 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 CCAR1Q8IX12 1150 aaKnown RBP18.17■□□□□ 0.5
BRF1-212ENST00000547562 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
BRF1-212ENST00000547562 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
BRF1-212ENST00000547562 CBX8Q9HC52 389 aa18.17■□□□□ 0.5
BRF1-212ENST00000547562 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
BRF1-212ENST00000547562 APPP05067 770 aa18.16■□□□□ 0.5
BRF1-212ENST00000547562 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
BRF1-212ENST00000547562 C8orf76Q96K31 380 aa18.16■□□□□ 0.5
BRF1-212ENST00000547562 LAMB2P55268 1798 aa18.16■□□□□ 0.5
BRF1-212ENST00000547562 A0A0G2JS52 829 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 ACSBG1Q96GR2 724 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms