RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 BRIP1Q9BX63 1249 aa20.11■□□□□ 0.81
LETMD1-210ENST00000547555 RIOK3O14730 519 aaKnown RBP20.1■□□□□ 0.81
LETMD1-210ENST00000547555 PSMA5P28066 241 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 RUFY3Q7L099 469 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 SNRKQ9NRH2 765 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 KCND1Q9NSA2 647 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 PNMA6EA0A0J9YXQ4 647 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 KIF2AO00139 706 aaPredicted RBP20.1■□□□□ 0.81
LETMD1-210ENST00000547555 TUBB4AP04350 444 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 HSP90B1P14625 803 aaKnown RBP20.1■□□□□ 0.81
LETMD1-210ENST00000547555 TDRD7Q8NHU6 1098 aaKnown RBP20.1■□□□□ 0.81
LETMD1-210ENST00000547555 CHAMP1Q96JM3 812 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 NUP62CLQ9H1M0 184 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 KCNF1Q9H3M0 494 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 CYP46A1Q9Y6A2 500 aa20.1■□□□□ 0.81
LETMD1-210ENST00000547555 KLRG2A4D1S0 409 aaPredicted RBP20.09■□□□□ 0.81
LETMD1-210ENST00000547555 PDE8AO60658 829 aa20.09■□□□□ 0.81
LETMD1-210ENST00000547555 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
LETMD1-210ENST00000547555 KAZALD1Q96I82 304 aa20.09■□□□□ 0.81
LETMD1-210ENST00000547555 BRCA1P38398 1863 aaKnown RBP20.08■□□□□ 0.81
LETMD1-210ENST00000547555 MTX1Q13505 466 aa20.08■□□□□ 0.81
LETMD1-210ENST00000547555 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.81
LETMD1-210ENST00000547555 GPATCH3Q96I76 525 aa20.08■□□□□ 0.81
LETMD1-210ENST00000547555 SUCLG2Q96I99 432 aa20.08■□□□□ 0.81
LETMD1-210ENST00000547555 ZKSCAN1P17029 563 aaPredicted RBP20.07■□□□□ 0.8
LETMD1-210ENST00000547555 CRY2Q49AN0 593 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 SARM1Q6SZW1 724 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 ERC1Q8IUD2 1116 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 CD2APQ9Y5K6 639 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 GJB2P29033 226 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 PDE6BP35913 854 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 FOXO4P98177 505 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 C3orf67Q6ZVT6 689 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 PLA2G4DQ86XP0 818 aa20.07■□□□□ 0.8
LETMD1-210ENST00000547555 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
LETMD1-210ENST00000547555 FIBPO43427 364 aa20.06■□□□□ 0.8
LETMD1-210ENST00000547555 CTSWP56202 376 aa20.06■□□□□ 0.8
LETMD1-210ENST00000547555 SF3B3Q15393 1217 aaKnown RBP20.06■□□□□ 0.8
LETMD1-210ENST00000547555 RABL6Q3YEC7 729 aaPredicted RBP20.06■□□□□ 0.8
LETMD1-210ENST00000547555 SLFNL1Q499Z3 407 aa20.06■□□□□ 0.8
LETMD1-210ENST00000547555 ZNF830Q96NB3 372 aaPredicted RBP20.06■□□□□ 0.8
LETMD1-210ENST00000547555 NLRP3Q96P20 1036 aa20.06■□□□□ 0.8
LETMD1-210ENST00000547555 PDRG1Q9NUG6 133 aa20.06■□□□□ 0.8
LETMD1-210ENST00000547555 CTAGE5O15320 804 aa20.05■□□□□ 0.8
LETMD1-210ENST00000547555 EPHA10Q5JZY3 1008 aa20.05■□□□□ 0.8
LETMD1-210ENST00000547555 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
LETMD1-210ENST00000547555 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
LETMD1-210ENST00000547555 CSF1RP07333 972 aa20.04■□□□□ 0.8
LETMD1-210ENST00000547555 TYRO3Q06418 890 aa20.04■□□□□ 0.8
LETMD1-210ENST00000547555 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
LETMD1-210ENST00000547555 BICC1Q9H694 974 aaKnown RBP20.04■□□□□ 0.8
LETMD1-210ENST00000547555 PYCARDQ9ULZ3 195 aa20.04■□□□□ 0.8
LETMD1-210ENST00000547555 MORC2Q9Y6X9 1032 aaPredicted RBP20.04■□□□□ 0.8
LETMD1-210ENST00000547555 TGFB2P61812 414 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 CBX1P83916 185 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 TAF1P21675 1872 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 SRGNP10124 158 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 DNM1Q05193 864 aaKnown RBP20.03■□□□□ 0.8
LETMD1-210ENST00000547555 TSGA10IPQ3SY00 556 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 ATL3Q6DD88 541 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 TICAM2Q86XR7 235 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 EVI5LQ96CN4 794 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 CLSTN2Q9H4D0 955 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 HMG20BQ9P0W2 317 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 CTNNA3Q9UI47 895 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 DDX41Q9UJV9 622 aaKnown RBP20.03■□□□□ 0.8
LETMD1-210ENST00000547555 MRVI1Q9Y6F6 885 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 CACNA1SQ13698 1873 aa20.03■□□□□ 0.8
LETMD1-210ENST00000547555 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.8
LETMD1-210ENST00000547555 ZNF75DP51815 510 aa20.02■□□□□ 0.8
LETMD1-210ENST00000547555 CHMP4CQ96CF2 233 aa20.02■□□□□ 0.8
LETMD1-210ENST00000547555 MRFAP1L1Q96HT8 127 aa20.02■□□□□ 0.8
LETMD1-210ENST00000547555 TNMDQ9H2S6 317 aa20.02■□□□□ 0.8
LETMD1-210ENST00000547555 PPP1R1BQ9UD71 204 aaPredicted RBP20.02■□□□□ 0.8
LETMD1-210ENST00000547555 SURF6O75683 361 aaKnown RBP20.01■□□□□ 0.79
LETMD1-210ENST00000547555 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
LETMD1-210ENST00000547555 NCBP1Q09161 790 aaKnown RBP20.01■□□□□ 0.79
LETMD1-210ENST00000547555 NECTIN1Q15223 517 aa20.01■□□□□ 0.79
LETMD1-210ENST00000547555 CCDC152Q4G0S7 254 aa20.01■□□□□ 0.79
LETMD1-210ENST00000547555 NOL8Q76FK4 1167 aaKnown RBP20.01■□□□□ 0.79
LETMD1-210ENST00000547555 RASEFQ8IZ41 740 aa20.01■□□□□ 0.79
LETMD1-210ENST00000547555 CCDC112Q8NEF3 446 aa20.01■□□□□ 0.79
LETMD1-210ENST00000547555 FHDC1Q9C0D6 1143 aaPredicted RBP20.01■□□□□ 0.79
LETMD1-210ENST00000547555 COL4A1P02462 1669 aa20.01■□□□□ 0.79
LETMD1-210ENST00000547555 LARP1BQ659C4 914 aaKnown RBP20■□□□□ 0.79
LETMD1-210ENST00000547555 LMBR1LQ6UX01 489 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 C2CD5Q86YS7 1000 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 H0YIN7 160 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 NPR1P16066 1061 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 KCNA3P22001 575 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 SPEF2Q9C093 1822 aa20■□□□□ 0.79
LETMD1-210ENST00000547555 CCDC66A2RUB6 948 aa19.99■□□□□ 0.79
LETMD1-210ENST00000547555 AP5Z1O43299 807 aa19.99■□□□□ 0.79
LETMD1-210ENST00000547555 CHRNA5P30532 468 aa19.99■□□□□ 0.79
LETMD1-210ENST00000547555 KCNJ6P48051 423 aa19.99■□□□□ 0.79
LETMD1-210ENST00000547555 STYK1Q6J9G0 422 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms