RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 PTCH2Q9Y6C5 1203 aa7.52□□□□□ -1.21
PFDN5-205ENST00000547228 AKAP11Q9UKA4 1901 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 ZNF316A6NFI3 1004 aaPredicted RBP7.51□□□□□ -1.21
PFDN5-205ENST00000547228 MYO1BO43795 1136 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 CAPN2P17655 700 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 ATP2B4P23634 1241 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 HOXD10P28358 340 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 CNGB1Q14028 1251 aaPredicted RBP7.51□□□□□ -1.21
PFDN5-205ENST00000547228 STRIP1Q5VSL9 837 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 ANKRD13AQ8IZ07 590 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 DEFB123Q8N688 67 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 XAGE3Q8WTP9 111 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 FAM89AQ96GI7 184 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 DEFB129Q9H1M3 183 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 PRO3102Q9H379 93 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 STXBP5LQ9Y2K9 1186 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 PPP2R3BQ9Y5P8 575 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 ZNF609O15014 1411 aa7.51□□□□□ -1.21
PFDN5-205ENST00000547228 TESPA1A2RU30 521 aaPredicted RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 IRS4O14654 1257 aaPredicted RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 EVI5O60447 810 aa7.5□□□□□ -1.21
PFDN5-205ENST00000547228 GTF2A2P52657 109 aa7.5□□□□□ -1.21
PFDN5-205ENST00000547228 PDIA6Q15084 440 aa7.5□□□□□ -1.21
PFDN5-205ENST00000547228 TAF1CQ15572 869 aaPredicted RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 HELBQ8NG08 1087 aaPredicted RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 SH3TC2Q8TF17 1288 aa7.5□□□□□ -1.21
PFDN5-205ENST00000547228 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 PNNQ9H307 717 aaKnown RBP7.5□□□□□ -1.21
PFDN5-205ENST00000547228 XDHP47989 1333 aa7.5□□□□□ -1.21
PFDN5-205ENST00000547228 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
PFDN5-205ENST00000547228 SASH1O94885 1247 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 GJA8P48165 433 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 MKRN4PQ13434 485 aaPredicted RBP7.49□□□□□ -1.21
PFDN5-205ENST00000547228 DLGAP5Q15398 846 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 CCDC152Q4G0S7 254 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 TTLL5Q6EMB2 1281 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 PLBD2Q8NHP8 589 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 CLMNQ96JQ2 1002 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 PTPN18Q99952 460 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 COA1Q9GZY4 146 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 BIN2Q9UBW5 565 aaPredicted RBP7.49□□□□□ -1.21
PFDN5-205ENST00000547228 TSPYL4Q9UJ04 414 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 SERPINA10Q9UK55 444 aa7.49□□□□□ -1.21
PFDN5-205ENST00000547228 ANXA1P04083 346 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 GJB1P08034 283 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 UBXN2AP68543 259 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 TRIM28Q13263 835 aaKnown RBP7.48□□□□□ -1.21
PFDN5-205ENST00000547228 RTL5Q5HYW3 569 aaPredicted RBP7.48□□□□□ -1.21
PFDN5-205ENST00000547228 DACT2Q5SW24 774 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 ANKRD18AQ8IVF6 992 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 LRCH3Q96II8 777 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 TRIM47Q96LD4 638 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 BABAM1Q9NWV8 329 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 STAP2Q9UGK3 403 aa7.48□□□□□ -1.21
PFDN5-205ENST00000547228 CCL15-CCL14A0A0B4J2E2 113 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 ATP5J2-PTCD1G3V325 749 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 SOX1O00570 391 aaPredicted RBP7.47□□□□□ -1.21
PFDN5-205ENST00000547228 TLR2O60603 784 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 USP2O75604 605 aaPredicted RBP7.47□□□□□ -1.21
PFDN5-205ENST00000547228 GRK4P32298 578 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 BMP8BP34820 402 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 LACTBP83111 547 aaPredicted RBP7.47□□□□□ -1.21
PFDN5-205ENST00000547228 FGD1P98174 961 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 CCL15Q16663 113 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 CCDC27Q2M243 656 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 PROSER3Q2NL68 480 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 KIAA0825Q8IV33 1275 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
PFDN5-205ENST00000547228 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
PFDN5-205ENST00000547228 RAET1EQ8TD07 263 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 OPTNQ96CV9 577 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 MS4A4AQ96JQ5 239 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 PKNOX2Q96KN3 472 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 CDC5LQ99459 802 aaKnown RBP7.47□□□□□ -1.21
PFDN5-205ENST00000547228 ISCA1Q9BUE6 129 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 SEC31BQ9NQW1 1179 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 FZD1Q9UP38 647 aa7.47□□□□□ -1.21
PFDN5-205ENST00000547228 DUOX1Q9NRD9 1551 aa7.46□□□□□ -1.21
PFDN5-205ENST00000547228 FARP2O94887 1054 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 TFRCP02786 760 aaKnown RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 CCL5P13501 91 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 IRX6P78412 446 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 TNFAIP1Q13829 316 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 MTFR1Q15390 333 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 UBE2Q1Q7Z7E8 422 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 RNF25Q96BH1 459 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 ZBED3Q96IU2 234 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 MXD3Q9BW11 206 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 ELP3Q9H9T3 547 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 ZCCHC17Q9NP64 241 aaKnown RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 PRDM6Q9NQX0 595 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 MTMR10Q9NXD2 777 aa7.46□□□□□ -1.22
PFDN5-205ENST00000547228 MKI67P46013 3256 aaKnown RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 SIPA1L3O60292 1781 aaPredicted RBP7.46□□□□□ -1.22
PFDN5-205ENST00000547228 COL1A1P02452 1464 aaPredicted RBP7.45□□□□□ -1.22
PFDN5-205ENST00000547228 COL3A1P02461 1466 aaPredicted RBP7.45□□□□□ -1.22
PFDN5-205ENST00000547228 PDE8AO60658 829 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms