RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CCDC51Q96ER9 411 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 UTP14AQ9BVJ6 771 aaKnown RBP14.51□□□□□ -0.09
PTCH1-212ENST00000546744 CARD6Q9BX69 1037 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 ZC3H13Q5T200 1668 aaKnown RBP14.51□□□□□ -0.09
PTCH1-212ENST00000546744 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.09
PTCH1-212ENST00000546744 SEPT6Q14141 434 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 TMTC1Q8IUR5 882 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 BANK1Q8NDB2 785 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 MTRF1LQ9UGC7 380 aaKnown RBP14.51□□□□□ -0.09
PTCH1-212ENST00000546744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTCH1-212ENST00000546744 CBX8Q9HC52 389 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 MBIPQ9NS73 344 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 SBNO2Q9Y2G9 1366 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 BICDL2A1A5D9 508 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 CHMLP26374 656 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 ETF1P62495 437 aaKnown RBP14.5□□□□□ -0.09
PTCH1-212ENST00000546744 APBA1Q02410 837 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 AMOTQ4VCS5 1084 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 STXBP4Q6ZWJ1 553 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 CLTCQ00610 1675 aaKnown RBP14.5□□□□□ -0.09
PTCH1-212ENST00000546744 ALDH1L1O75891 902 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 WHAMMP3Q1A5X7 153 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 CARD14Q9BXL6 1004 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 ZEB2O60315 1214 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 MAP3K12Q12852 859 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 PPP1R42Q7Z4L9 355 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 TSKSQ9UJT2 592 aa14.5□□□□□ -0.09
PTCH1-212ENST00000546744 RAD21O60216 631 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 SSBP05455 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTCH1-212ENST00000546744 NOP2P46087 812 aaKnown RBP14.49□□□□□ -0.09
PTCH1-212ENST00000546744 RUFY3Q7L099 469 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 SMC6Q96SB8 1091 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 TM6SF1Q9BZW5 370 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 FYB1O15117 783 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 PHACTR2O75167 634 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 CCT2P78371 535 aaKnown RBP14.49□□□□□ -0.09
PTCH1-212ENST00000546744 CLUL1Q15846 466 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 CCDC40Q4G0X9 1142 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 SH2D4BQ5SQS7 431 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 IFIT3O14879 490 aaKnown RBP14.49□□□□□ -0.09
PTCH1-212ENST00000546744 CDC25BP30305 580 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 CATIPQ7Z7H3 387 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 MLKLQ8NB16 471 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 EXOC4Q96A65 974 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 STRN4Q9NRL3 753 aa14.49□□□□□ -0.09
PTCH1-212ENST00000546744 GOLGA6BA6NDN3 693 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 EVA1CP58658 441 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 NAP1L3Q99457 506 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-212ENST00000546744 RHOXF2BP0C7M4 288 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 RLBP1P12271 317 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 RABGGTAQ92696 567 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 JAKMIP2Q96AA8 810 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 RHOXF2Q9BQY4 288 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 GBP1P32455 592 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 MATR3P43243 847 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTCH1-212ENST00000546744 IFT20Q8IY31 132 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 KIAA1524Q8TCG1 905 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTCH1-212ENST00000546744 CNNM2Q9H8M5 875 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 CEP85Q6P2H3 762 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 NECAB1Q8N987 351 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 CCDC110Q8TBZ0 833 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 CABS1Q96KC9 395 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 TMX1Q9H3N1 280 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 PUF60Q9UHX1 559 aaKnown RBP14.48□□□□□ -0.09
PTCH1-212ENST00000546744 USH1CQ9Y6N9 552 aa14.48□□□□□ -0.09
PTCH1-212ENST00000546744 POLR3DP05423 398 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 LTKP29376 864 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 AP1ARQ63HQ0 302 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 THUMPD2Q9BTF0 503 aaKnown RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 SEC63Q9UGP8 760 aaKnown RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 A2ML1A8K2U0 1454 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 ATP2A1O14983 1001 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 LUC7L3O95232 432 aaKnown RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 UBE4AQ14139 1066 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 RRAGBQ5VZM2 374 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 CYP26C1Q6V0L0 522 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 CCDC26Q8TAB7 109 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 A0A1W2PRG0 241 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 MTMR3Q13615 1198 aa14.47□□□□□ -0.09
PTCH1-212ENST00000546744 RBBP5Q15291 538 aaKnown RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 FEZ2Q9UHY8 353 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-212ENST00000546744 A0A087WUV0 522 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 IDH1O75874 414 aaKnown RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 PAK2Q13177 524 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 NUP58Q9BVL2 599 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 KDM5AP29375 1690 aaKnown RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 SLFNL1Q499Z3 407 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 PROSER2Q86WR7 435 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 SREK1Q8WXA9 508 aaKnown RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 CFAP57Q96MR6 1250 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms