RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 FSIP1Q8NA03 581 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 TTLL11Q8NHH1 800 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 KCNF1Q9H3M0 494 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 DENND2AQ9ULE3 1009 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 FOXP2O15409 715 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 PRKCSHP14314 528 aaPredicted RBP18.29■□□□□ 0.52
SCAP-215ENST00000545718 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
SCAP-215ENST00000545718 C8orf76Q96K31 380 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 GOLPH3LQ9H4A5 285 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 GOLGA6L19H0YKK7 550 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 SNAP23O00161 211 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 CCDC186Q7Z3E2 898 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■■□ 20.3
SCAP-215ENST00000545718 ORC3Q9UBD5 711 aaPredicted RBP18.29■□□□□ 0.52
SCAP-215ENST00000545718 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
SCAP-215ENST00000545718 PARP4Q9UKK3 1724 aaKnown RBP18.29■□□□□ 0.52
SCAP-215ENST00000545718 FDPSP14324 419 aaKnown RBP18.28■□□□□ 0.52
SCAP-215ENST00000545718 TRDNQ13061 729 aa18.28■□□□□ 0.52
SCAP-215ENST00000545718 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
SCAP-215ENST00000545718 TSC1Q92574 1164 aa18.28■□□□□ 0.52
SCAP-215ENST00000545718 CTSWP56202 376 aa18.28■□□□□ 0.52
SCAP-215ENST00000545718 TRIM28Q13263 835 aaKnown RBP18.28■□□□□ 0.52
SCAP-215ENST00000545718 CCDC144CPQ8IYA2 1237 aa18.28■□□□□ 0.52
SCAP-215ENST00000545718 CSF1RP07333 972 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCAP-215ENST00000545718 RCOR1Q9UKL0 485 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 TJP1Q07157 1748 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 TERF1P54274 439 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 STK38Q15208 465 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 SDF4Q9BRK5 362 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 RIPOR2Q9Y4F9 1068 aa18.27■□□□□ 0.52
SCAP-215ENST00000545718 BECN2A8MW95 431 aa18.27■□□□□ 0.51
SCAP-215ENST00000545718 PHKA1P46020 1223 aa18.27■□□□□ 0.51
SCAP-215ENST00000545718 LRMPQ12912 555 aa18.27■□□□□ 0.51
SCAP-215ENST00000545718 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.51
SCAP-215ENST00000545718 A0A1B0GVL5 298 aa18.26■□□□□ 0.51
SCAP-215ENST00000545718 C11orf57Q6ZUT1 292 aaPredicted RBP18.26■□□□□ 0.51
SCAP-215ENST00000545718 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
SCAP-215ENST00000545718 TNS2Q63HR2 1409 aa18.26■□□□□ 0.51
SCAP-215ENST00000545718 ILDR1Q86SU0 546 aaPredicted RBP18.26■□□□□ 0.51
SCAP-215ENST00000545718 PIH1D3Q9NQM4 214 aaKnown RBP18.25■□□□□ 0.51
SCAP-215ENST00000545718 FBXO3Q9UK99 471 aa18.25■□□□□ 0.51
SCAP-215ENST00000545718 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
SCAP-215ENST00000545718 DHX16O60231 1041 aaKnown RBP18.25■□□□□ 0.51
SCAP-215ENST00000545718 ANTXR2P58335 489 aa18.25■□□□□ 0.51
SCAP-215ENST00000545718 LAMA4Q16363 1823 aa18.25■□□□□ 0.51
SCAP-215ENST00000545718 SALL1Q9NSC2 1324 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
SCAP-215ENST00000545718 MB21D2Q8IYB1 491 aaPredicted RBP18.24■□□□□ 0.51
SCAP-215ENST00000545718 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 CLIC4Q9Y696 253 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 ZNF532Q9HCE3 1301 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 CYP19A1P11511 503 aaPredicted RBP18.24■□□□□ 0.51
SCAP-215ENST00000545718 ZNF75DP51815 510 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 CCDC102BQ68D86 513 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 MICU3Q86XE3 530 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 KIAA1524Q8TCG1 905 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 CLIP2Q9UDT6 1046 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 PCDHA7Q9UN72 937 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
SCAP-215ENST00000545718 AIFM3Q96NN9 605 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 PLA2G12BQ9BX93 195 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
SCAP-215ENST00000545718 B4E1Z4 1266 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 EXOC5O00471 708 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 PDE8BO95263 885 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 ADD2P35612 726 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 FAM160A1Q05DH4 1040 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 GNL2Q13823 731 aaKnown RBP18.23■□□□□ 0.51
SCAP-215ENST00000545718 SYNE3Q6ZMZ3 975 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 AIDAQ96BJ3 306 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 TPM3P06753 285 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 ZSCAN25Q6NSZ9 544 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
SCAP-215ENST00000545718 SNW1Q13573 536 aaKnown RBP18.22■□□□□ 0.51
SCAP-215ENST00000545718 STX1AQ16623 288 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 TBC1D10CQ8IV04 446 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 TDRD7Q8NHU6 1098 aaKnown RBP18.22■□□□□ 0.51
SCAP-215ENST00000545718 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 MYL10Q9BUA6 226 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 UBR2Q8IWV8 1755 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 MRPS27Q92552 414 aaKnown RBP18.22■□□□□ 0.51
SCAP-215ENST00000545718 ACSBG1Q96GR2 724 aa18.22■□□□□ 0.51
SCAP-215ENST00000545718 PDE8AO60658 829 aa18.21■□□□□ 0.51
SCAP-215ENST00000545718 PHKBQ93100 1093 aa18.21■□□□□ 0.51
SCAP-215ENST00000545718 BIN1O00499 593 aa18.21■□□□□ 0.51
SCAP-215ENST00000545718 DYNC1I1O14576 645 aa18.21■□□□□ 0.51
SCAP-215ENST00000545718 FBXO18Q8NFZ0 1043 aa18.21■□□□□ 0.51
SCAP-215ENST00000545718 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
SCAP-215ENST00000545718 CTAGE5O15320 804 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms