RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MIGA1Q8NAN2 632 aa18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 PHKBQ93100 1093 aa18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 JAG2Q9Y219 1238 aa18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 PCCAP05165 728 aaPredicted RBP18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 FDPSP14324 419 aaKnown RBP18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 B4E1Z4 1266 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 PRKAB2O43741 272 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 EXOSC10Q01780 885 aaKnown RBP18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 LRMPQ12912 555 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 MICU3Q86XE3 530 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 GLI3P10071 1580 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 A0A1B0GVL5 298 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 ANKRD18BA2A2Z9 1011 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 OFD1O75665 1012 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 CTDSPL2Q05D32 466 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 TSGA10IPQ3SY00 556 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 MRC1P22897 1456 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 BIN1O00499 593 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 PFKFB2O60825 505 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 CTSWP56202 376 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 SLC51AQ86UW1 340 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 PYCARDQ9ULZ3 195 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 RIPOR2Q9Y4F9 1068 aa18.53■□□□□ 0.56
SNRNP70-203ENST00000544278 ZNF532Q9HCE3 1301 aa18.52■□□□□ 0.56
SNRNP70-203ENST00000544278 ANTXR2P58335 489 aa18.52■□□□□ 0.56
SNRNP70-203ENST00000544278 RALYLQ86SE5 291 aaKnown RBP18.52■□□□□ 0.56
SNRNP70-203ENST00000544278 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
SNRNP70-203ENST00000544278 CBX8Q9HC52 389 aa18.52■□□□□ 0.56
SNRNP70-203ENST00000544278 SUSD4Q5VX71 490 aa18.52■□□□□ 0.55
SNRNP70-203ENST00000544278 CCDC102BQ68D86 513 aa18.52■□□□□ 0.55
SNRNP70-203ENST00000544278 PTF1AQ7RTS3 328 aa18.52■□□□□ 0.55
SNRNP70-203ENST00000544278 TBC1D10CQ8IV04 446 aa18.52■□□□□ 0.55
SNRNP70-203ENST00000544278 DSCC1Q9BVC3 393 aa18.52■□□□□ 0.55
SNRNP70-203ENST00000544278 EP400Q96L91 3159 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 PTGS1P23219 599 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 IMMTQ16891 758 aaKnown RBP18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 CSPP1Q1MSJ5 1256 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 ZNF213O14771 459 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 CPLX1O14810 134 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 MARCKSP29966 332 aaPredicted RBP18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 BCAMP50895 628 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 ILDR1Q86SU0 546 aaPredicted RBP18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 SCAND2PQ9GZW5 306 aaPredicted RBP18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 ARMT1Q9H993 441 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 DCCP43146 1447 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 UQCRHLA0A096LP55 91 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 UQCRHP07919 91 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 CYB5R4Q7L1T6 521 aa18.51■□□□□ 0.55
SNRNP70-203ENST00000544278 PTPN21Q16825 1174 aa18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 C11orf57Q6ZUT1 292 aaPredicted RBP18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 ORC3Q9UBD5 711 aaPredicted RBP18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 CLIC4Q9Y696 253 aa18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 JCADQ9P266 1359 aa18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 ARID5BQ14865 1188 aa18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 TRIM5Q9C035 493 aa18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 AKAP2Q9Y2D5 859 aa18.5■□□□□ 0.55
SNRNP70-203ENST00000544278 ATP2B1P20020 1258 aa18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 MAGEB6Q8N7X4 407 aa18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 ABCF2Q9UG63 623 aa18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 PDIA4P13667 645 aaKnown RBP18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 FSIP1Q8NA03 581 aa18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 APPBP2Q92624 585 aa18.49■□□□□ 0.55
SNRNP70-203ENST00000544278 KIF28PB7ZC32 967 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 CIAO1O76071 339 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 CSF1RP07333 972 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 ZNF165P49910 485 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 SASS6Q6UVJ0 657 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
SNRNP70-203ENST00000544278 hCG_1642624A0A1W2PR95 340 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 SF3A1Q15459 793 aaKnown RBP18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 PDE8BO95263 885 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 NFXL1Q6ZNB6 911 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 C8orf76Q96K31 380 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 GPR108Q9NPR9 543 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 NIP7Q9Y221 180 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 MBD4O95243 580 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 PDE6AP16499 860 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 ITPK1Q13572 414 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 RASGRF1Q13972 1273 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 SPECC1Q5M775 1068 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 CCDC186Q7Z3E2 898 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 HPS5Q9UPZ3 1129 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 PKD1L3Q7Z443 1732 aa18.47■□□□□ 0.55
SNRNP70-203ENST00000544278 RIC1Q4ADV7 1423 aa18.46■□□□□ 0.55
SNRNP70-203ENST00000544278 AIDAQ96BJ3 306 aa18.46■□□□□ 0.55
SNRNP70-203ENST00000544278 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
SNRNP70-203ENST00000544278 TACC3Q9Y6A5 838 aa18.46■□□□□ 0.55
SNRNP70-203ENST00000544278 BAZ2BQ9UIF8 2168 aaKnown RBP18.46■□□□□ 0.55
SNRNP70-203ENST00000544278 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
SNRNP70-203ENST00000544278 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SNRNP70-203ENST00000544278 CLSTN2Q9H4D0 955 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms