RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
CLPB-211ENST00000542555 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.65
CLPB-211ENST00000542555 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
CLPB-211ENST00000542555 CHRNA5P30532 468 aa10.95□□□□□ -0.66
CLPB-211ENST00000542555 INTS6LQ5JSJ4 861 aaKnown RBP10.95□□□□□ -0.66
CLPB-211ENST00000542555 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
CLPB-211ENST00000542555 LYPD4Q6UWN0 246 aa10.95□□□□□ -0.66
CLPB-211ENST00000542555 RNF217Q8TC41 542 aa10.95□□□□□ -0.66
CLPB-211ENST00000542555 TESK2Q96S53 571 aa10.95□□□□□ -0.66
CLPB-211ENST00000542555 WASHC2AQ641Q2 1341 aa10.94□□□□□ -0.66
CLPB-211ENST00000542555 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
CLPB-211ENST00000542555 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
CLPB-211ENST00000542555 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
CLPB-211ENST00000542555 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
CLPB-211ENST00000542555 RSPH6AQ9H0K4 717 aa10.94□□□□□ -0.66
CLPB-211ENST00000542555 ARFGEF1Q9Y6D6 1849 aa10.93□□□□□ -0.66
CLPB-211ENST00000542555 CRKLP46109 303 aaKnown RBP10.93□□□□□ -0.66
CLPB-211ENST00000542555 MTHFSP49914 203 aa10.93□□□□□ -0.66
CLPB-211ENST00000542555 TTLL6Q8N841 843 aa10.93□□□□□ -0.66
CLPB-211ENST00000542555 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
CLPB-211ENST00000542555 KDRP35968 1356 aa10.92□□□□□ -0.66
CLPB-211ENST00000542555 USP42Q9H9J4 1324 aaKnown RBP10.92□□□□□ -0.66
CLPB-211ENST00000542555 H0YIN7 160 aa10.92□□□□□ -0.66
CLPB-211ENST00000542555 PTK2Q05397 1052 aa10.92□□□□□ -0.66
CLPB-211ENST00000542555 ZNF530Q6P9A1 599 aaPredicted RBP10.92□□□□□ -0.66
CLPB-211ENST00000542555 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
CLPB-211ENST00000542555 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
CLPB-211ENST00000542555 PHF20L1A8MW92 1017 aa10.91□□□□□ -0.66
CLPB-211ENST00000542555 CELA2BP08218 269 aaPredicted RBP10.91□□□□□ -0.66
CLPB-211ENST00000542555 CTCFP49711 727 aaPredicted RBP10.91□□□□□ -0.66
CLPB-211ENST00000542555 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
CLPB-211ENST00000542555 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
CLPB-211ENST00000542555 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
CLPB-211ENST00000542555 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
CLPB-211ENST00000542555 POLRMTO00411 1230 aaKnown RBP10.9□□□□□ -0.66
CLPB-211ENST00000542555 MSTNO14793 375 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 RAB15P59190 212 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 DDR1Q08345 913 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 PDE4DQ08499 809 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 LYSMD3Q7Z3D4 306 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 SLC4A9Q96Q91 983 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 NCAPD2Q15021 1401 aa10.9□□□□□ -0.66
CLPB-211ENST00000542555 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 NPHP1O15259 732 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 ADH1AP07327 375 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 TM4SF1P30408 202 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 USPL1Q5W0Q7 1092 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 FOXR1Q6PIV2 292 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 PODNQ7Z5L7 613 aa10.89□□□□□ -0.67
CLPB-211ENST00000542555 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
CLPB-211ENST00000542555 SERPINB2P05120 415 aa10.88□□□□□ -0.67
CLPB-211ENST00000542555 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
CLPB-211ENST00000542555 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
CLPB-211ENST00000542555 BEND7Q8N7W2 519 aaPredicted RBP10.88□□□□□ -0.67
CLPB-211ENST00000542555 NFATC2IPQ8NCF5 419 aa10.88□□□□□ -0.67
CLPB-211ENST00000542555 ZNF622Q969S3 477 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLPB-211ENST00000542555 TMPRSS4Q9NRS4 437 aa10.88□□□□□ -0.67
CLPB-211ENST00000542555 POLKQ9UBT6 870 aa10.88□□□□□ -0.67
CLPB-211ENST00000542555 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
CLPB-211ENST00000542555 TNNT2P45379 298 aaPredicted RBP10.87□□□□□ -0.67
CLPB-211ENST00000542555 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
CLPB-211ENST00000542555 LRRN4Q8WUT4 740 aa10.87□□□□□ -0.67
CLPB-211ENST00000542555 FOXN1O15353 648 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 PDE6BP35913 854 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 PTGIRP43119 386 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 NR6A1Q15406 480 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 NARFQ9UHQ1 456 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 GPSM3Q9Y4H4 160 aa10.86□□□□□ -0.67
CLPB-211ENST00000542555 KDM6AO15550 1401 aaPredicted RBP10.85□□□□□ -0.67
CLPB-211ENST00000542555 COL5A3P25940 1745 aaPredicted RBP10.85□□□□□ -0.67
CLPB-211ENST00000542555 A0A087WZG4 1122 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 GAS6Q14393 721 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 NFIXQ14938 502 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 PLA2G4EQ3MJ16 856 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 SOGA3Q5TF21 947 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 FOXD4L5Q5VV16 416 aaPredicted RBP10.85□□□□□ -0.67
CLPB-211ENST00000542555 INTS5Q6P9B9 1019 aaKnown RBP10.85□□□□□ -0.67
CLPB-211ENST00000542555 PRICKLE2Q7Z3G6 844 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 PNMA1Q8ND90 353 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 POLR3GLQ9BT43 218 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 SBF1O95248 1867 aa10.85□□□□□ -0.67
CLPB-211ENST00000542555 TMEM88BA6NKF7 163 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 NFKBIEO00221 500 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 C21orf2O43822 256 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 LDHDQ86WU2 507 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 DZIP3Q86Y13 1208 aaKnown RBP10.84□□□□□ -0.67
CLPB-211ENST00000542555 GALNT6Q8NCL4 622 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 GMCL1Q96IK5 515 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 TAOK3Q9H2K8 898 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 CUEDC1Q9NWM3 386 aaPredicted RBP10.84□□□□□ -0.67
CLPB-211ENST00000542555 CNTNAP1P78357 1384 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 CNTNAP5Q8WYK1 1306 aa10.84□□□□□ -0.67
CLPB-211ENST00000542555 STARD3NLO95772 234 aa10.83□□□□□ -0.68
CLPB-211ENST00000542555 LBX1P52954 281 aa10.83□□□□□ -0.68
CLPB-211ENST00000542555 MAP2K1Q02750 393 aaPredicted RBP10.83□□□□□ -0.68
CLPB-211ENST00000542555 DNAJC10Q8IXB1 793 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms