RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 TNS2Q63HR2 1409 aa8.17□□□□□ -1.1
EPHA4-214ENST00000541600 RNF40O75150 1001 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 MRE11P49959 708 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 EIF4A1P60842 406 aaKnown RBP8.16□□□□□ -1.1
EPHA4-214ENST00000541600 DPYDQ12882 1025 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 MTX1Q13505 466 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 NPAS4Q8IUM7 802 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 GIPC2Q8TF65 315 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 LRRCC1Q9C099 1032 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
EPHA4-214ENST00000541600 BIN2Q9UBW5 565 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-214ENST00000541600 CRYBG1Q9Y4K1 1723 aa8.16□□□□□ -1.1
EPHA4-214ENST00000541600 SBF2Q86WG5 1849 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 RGPD3A6NKT7 1758 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-214ENST00000541600 RGPD4Q7Z3J3 1758 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 TNRC18O15417 2968 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-214ENST00000541600 ANKRD33BA6NCL7 494 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 ST18O60284 1047 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 PTK2Q05397 1052 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 PSME1Q06323 249 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 PTPRNQ16849 979 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 MAP7D1Q3KQU3 841 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 PLEKHO1Q53GL0 409 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-214ENST00000541600 BRICD5Q6PL45 260 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 BLOC1S3Q6QNY0 202 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 ARHGEF25Q86VW2 580 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 STK32BQ9NY57 414 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
EPHA4-214ENST00000541600 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.11
EPHA4-214ENST00000541600 F6X3S4 739 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 TCF3P15923 654 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 SCNN1AP37088 669 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 CLDN10P78369 228 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 KCNH2Q12809 1159 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 CUL4AQ13619 759 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 EML3Q32P44 896 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 HSP90AB4PQ58FF6 505 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 MARCH10Q8NA82 808 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 INTS4Q96HW7 963 aaKnown RBP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 ESYT1Q9BSJ8 1104 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 SIPA1L3O60292 1781 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-214ENST00000541600 KIF1AQ12756 1690 aa8.14□□□□□ -1.11
EPHA4-214ENST00000541600 COL24A1Q17RW2 1714 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 GOLGA6L22H0YM25 854 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 JUNDP17535 347 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 MX1P20591 662 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 CHMLP26374 656 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 KLHL40Q2TBA0 621 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 BEND3Q5T5X7 828 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 PDXDC2PQ6P474 469 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 TRAF7Q6Q0C0 670 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 TRIM50Q86XT4 487 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.11
EPHA4-214ENST00000541600 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 EGFL7Q9UHF1 273 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 PCDHB9Q9Y5E1 797 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 ALS2Q96Q42 1657 aa8.13□□□□□ -1.11
EPHA4-214ENST00000541600 UTYO14607 1347 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 PAPPAQ13219 1627 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 PNMA6EA0A0J9YXQ4 647 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 SNPHO15079 494 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 SMARCA5O60264 1052 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-214ENST00000541600 GRIN3BO60391 1043 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 BAG4O95429 457 aaKnown RBP8.12□□□□□ -1.11
EPHA4-214ENST00000541600 UBTFL1P0CB47 393 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-214ENST00000541600 MCCP23508 829 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 VAMP1P23763 118 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 ATP1A2P50993 1020 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
EPHA4-214ENST00000541600 SLC4A10Q6U841 1118 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 KIF1BPQ96EK5 621 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 ZNF594Q96JF6 807 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-214ENST00000541600 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
EPHA4-214ENST00000541600 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 WDR90Q96KV7 1748 aa8.12□□□□□ -1.11
EPHA4-214ENST00000541600 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 DKK1O94907 266 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 GCP02774 474 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
EPHA4-214ENST00000541600 CTHP32929 405 aa8.11□□□□□ -1.11
EPHA4-214ENST00000541600 ZNF445P59923 1031 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms