RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 IQSEC3Q9UPP2 1182 aaPredicted RBP33.67■■■□□ 2.98
CCM2-218ENST00000541586 ECE2O60344 883 aa33.67■■■□□ 2.98
CCM2-218ENST00000541586 CCDC102BQ68D86 513 aa33.66■■■□□ 2.98
CCM2-218ENST00000541586 FBXO33Q7Z6M2 555 aa33.66■■■□□ 2.98
CCM2-218ENST00000541586 COA1Q9GZY4 146 aa33.66■■■□□ 2.98
CCM2-218ENST00000541586 CD209Q9NNX6 404 aa33.66■■■□□ 2.98
CCM2-218ENST00000541586 CCDC88AQ3V6T2 1871 aa33.66■■■□□ 2.98
CCM2-218ENST00000541586 FRAT2O75474 233 aaPredicted RBP33.65■■■□□ 2.98
CCM2-218ENST00000541586 PHKA1P46020 1223 aa33.65■■■□□ 2.98
CCM2-218ENST00000541586 HAUS7Q99871 368 aa33.65■■■□□ 2.98
CCM2-218ENST00000541586 ESYT1Q9BSJ8 1104 aa33.64■■■□□ 2.98
CCM2-218ENST00000541586 KCNQ5Q9NR82 932 aa33.64■■■□□ 2.98
CCM2-218ENST00000541586 CCDC158Q5M9N0 1113 aa33.63■■■□□ 2.97
CCM2-218ENST00000541586 SBF1O95248 1867 aa33.62■■■□□ 2.97
CCM2-218ENST00000541586 FBXW7Q969H0 707 aa33.62■■■□□ 2.97
CCM2-218ENST00000541586 ZNRF3Q9ULT6 936 aa33.62■■■□□ 2.97
CCM2-218ENST00000541586 COL4A5P29400 1685 aa33.62■■■□□ 2.97
CCM2-218ENST00000541586 TTC39AQ5SRH9 613 aa33.62■■■□□ 2.97
CCM2-218ENST00000541586 PODNQ7Z5L7 613 aa33.62■■■□□ 2.97
CCM2-218ENST00000541586 YDJCA8MPS7 323 aa33.61■■■□□ 2.97
CCM2-218ENST00000541586 GNL3LQ9NVN8 582 aaKnown RBP33.61■■■□□ 2.97
CCM2-218ENST00000541586 JAG2Q9Y219 1238 aa33.61■■■□□ 2.97
CCM2-218ENST00000541586 NDUFB9Q9Y6M9 179 aa33.61■■■□□ 2.97
CCM2-218ENST00000541586 EDC3Q96F86 508 aaKnown RBP33.6■■■□□ 2.97
CCM2-218ENST00000541586 DNAJC2Q99543 621 aaKnown RBP33.6■■■□□ 2.97
CCM2-218ENST00000541586 RAD17O75943 681 aa33.59■■■□□ 2.97
CCM2-218ENST00000541586 REC8O95072 547 aa33.59■■■□□ 2.97
CCM2-218ENST00000541586 RBM25P49756 843 aaKnown RBP33.59■■■□□ 2.97
CCM2-218ENST00000541586 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.59■■■□□ 2.97
CCM2-218ENST00000541586 IL1R1P14778 569 aa33.59■■■□□ 2.97
CCM2-218ENST00000541586 TDRD7Q8NHU6 1098 aaKnown RBP33.58■■■□□ 2.97
CCM2-218ENST00000541586 EIF6P56537 245 aaKnown RBP33.57■■■□□ 2.96
CCM2-218ENST00000541586 CHAF1AQ13111 956 aaPredicted RBP33.57■■■□□ 2.96
CCM2-218ENST00000541586 FSD1Q9BTV5 496 aa33.57■■■□□ 2.96
CCM2-218ENST00000541586 USP26Q9BXU7 913 aa33.57■■■□□ 2.96
CCM2-218ENST00000541586 ARAP2Q8WZ64 1704 aa33.57■■■□□ 2.96
CCM2-218ENST00000541586 GTF2IP78347 998 aa33.56■■■□□ 2.96
CCM2-218ENST00000541586 DIAPH3Q9NSV4 1193 aa33.56■■■□□ 2.96
CCM2-218ENST00000541586 FZD9O00144 591 aa33.56■■■□□ 2.96
CCM2-218ENST00000541586 TTLL5Q6EMB2 1281 aa33.56■■■□□ 2.96
CCM2-218ENST00000541586 IL25Q9H293 177 aa33.56■■■□□ 2.96
CCM2-218ENST00000541586 IPO9Q96P70 1041 aaKnown RBP33.55■■■□□ 2.96
CCM2-218ENST00000541586 CXCL9Q07325 125 aa33.54■■■□□ 2.96
CCM2-218ENST00000541586 CWC27Q6UX04 472 aaKnown RBP33.54■■■□□ 2.96
CCM2-218ENST00000541586 HIP1O00291 1037 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 UQCRFS1P1P0C7P4 283 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 SNRKQ9NRH2 765 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 PAG1Q9NWQ8 432 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 CHD4Q14839 1912 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 SGSM2O43147 1006 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 RASGRF1Q13972 1273 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 SCARF1Q14162 830 aa33.53■■■□□ 2.96
CCM2-218ENST00000541586 USP17L3A6NCW0 530 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 USP17L4A6NCW7 530 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 GOLIM4O00461 696 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 ARID4AP29374 1257 aaPredicted RBP33.52■■■□□ 2.96
CCM2-218ENST00000541586 MCAMP43121 646 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 PI16Q6UXB8 463 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 USP17L1Q7RTZ2 530 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 ZNF512BQ96KM6 892 aaPredicted RBP33.52■■■□□ 2.96
CCM2-218ENST00000541586 DENND2AQ9ULE3 1009 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 GJA3Q9Y6H8 435 aa33.52■■■□□ 2.96
CCM2-218ENST00000541586 PSMD14O00487 310 aa33.51■■■□□ 2.96
CCM2-218ENST00000541586 CIAPIN1Q6FI81 312 aa33.51■■■□□ 2.96
CCM2-218ENST00000541586 DDRGK1Q96HY6 314 aa33.51■■■□□ 2.96
CCM2-218ENST00000541586 ZNF541Q9H0D2 1346 aa33.51■■■□□ 2.95
CCM2-218ENST00000541586 DICER1Q9UPY3 1922 aaKnown RBP33.51■■■□□ 2.95
CCM2-218ENST00000541586 RUFY2Q8WXA3 655 aa33.5■■■□□ 2.95
CCM2-218ENST00000541586 MXD3Q9BW11 206 aa33.5■■■□□ 2.95
CCM2-218ENST00000541586 KBTBD3Q8NAB2 608 aa33.5■■■□□ 2.95
CCM2-218ENST00000541586 ANO2Q9NQ90 1003 aa33.5■■■□□ 2.95
CCM2-218ENST00000541586 HMG20BQ9P0W2 317 aa33.5■■■□□ 2.95
CCM2-218ENST00000541586 RFX7Q2KHR2 1363 aa33.49■■■□□ 2.95
CCM2-218ENST00000541586 SPATA5Q8NB90 893 aa33.49■■■□□ 2.95
CCM2-218ENST00000541586 TNIP1Q15025 636 aa33.48■■■□□ 2.95
CCM2-218ENST00000541586 STRIP1Q5VSL9 837 aa33.48■■■□□ 2.95
CCM2-218ENST00000541586 SEMA3EO15041 775 aa33.48■■■□□ 2.95
CCM2-218ENST00000541586 NMIQ13287 307 aaPredicted RBP33.48■■■□□ 2.95
CCM2-218ENST00000541586 DPY19L2Q6NUT2 758 aa33.48■■■□□ 2.95
CCM2-218ENST00000541586 FAM227BQ96M60 508 aa33.48■■■□□ 2.95
CCM2-218ENST00000541586 ZBTB12Q9Y330 459 aaPredicted RBP33.48■■■□□ 2.95
CCM2-218ENST00000541586 SCN9AQ15858 1988 aa33.47■■■□□ 2.95
CCM2-218ENST00000541586 ANTXR1Q9H6X2 564 aa33.47■■■□□ 2.95
CCM2-218ENST00000541586 DDNO94850 711 aaPredicted RBP33.45■■■□□ 2.95
CCM2-218ENST00000541586 ZAP70P43403 619 aa33.45■■■□□ 2.95
CCM2-218ENST00000541586 MFSD14BQ5SR56 506 aa33.45■■■□□ 2.95
CCM2-218ENST00000541586 AKAP11Q9UKA4 1901 aa33.45■■■□□ 2.94
CCM2-218ENST00000541586 VIL1P09327 827 aaKnown RBP33.45■■■□□ 2.94
CCM2-218ENST00000541586 DACT2Q5SW24 774 aa33.45■■■□□ 2.94
CCM2-218ENST00000541586 KIF2CQ99661 725 aa33.45■■■□□ 2.94
CCM2-218ENST00000541586 FAM205AQ6ZU69 1335 aa33.44■■■□□ 2.94
CCM2-218ENST00000541586 A0A0D9SFI3 127 aa33.44■■■□□ 2.94
CCM2-218ENST00000541586 ABCF2Q9UG63 623 aa33.44■■■□□ 2.94
CCM2-218ENST00000541586 COL1A1P02452 1464 aaPredicted RBP33.43■■■□□ 2.94
CCM2-218ENST00000541586 TICAM2Q86XR7 235 aa33.43■■■□□ 2.94
CCM2-218ENST00000541586 WDR66Q8TBY9 1149 aa33.43■■■□□ 2.94
CCM2-218ENST00000541586 RSBN1LQ6PCB5 846 aaPredicted RBP33.42■■■□□ 2.94
CCM2-218ENST00000541586 TIAM2Q8IVF5 1701 aa33.42■■■□□ 2.94
CCM2-218ENST00000541586 RAD50Q92878 1312 aa33.42■■■□□ 2.94
CCM2-218ENST00000541586 F8W031 263 aaPredicted RBP33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms