RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
CDKN3-206ENST00000541304 SYTL4Q96C24 671 aaPredicted RBP7.32□□□□□ -1.24
CDKN3-206ENST00000541304 ITGB4P16144 1822 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 PTPRCP08575 1304 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 PLSCR1O15162 318 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 SPINT1O43278 529 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 GIGYF1O75420 1035 aaPredicted RBP7.31□□□□□ -1.24
CDKN3-206ENST00000541304 HDGFL1Q5TGJ6 251 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 ZSCAN1Q8NBB4 408 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 ARHGAP45Q92619 1136 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 DBF4Q9UBU7 674 aaPredicted RBP7.31□□□□□ -1.24
CDKN3-206ENST00000541304 C5P01031 1676 aa7.31□□□□□ -1.24
CDKN3-206ENST00000541304 BRWD3Q6RI45 1802 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 VAMP4O75379 141 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 RARSP54136 660 aaKnown RBP7.3□□□□□ -1.24
CDKN3-206ENST00000541304 SF3B2Q13435 895 aaKnown RBP7.3□□□□□ -1.24
CDKN3-206ENST00000541304 AAMPQ13685 434 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
CDKN3-206ENST00000541304 CHMP4BQ9H444 224 aaKnown RBP7.3□□□□□ -1.24
CDKN3-206ENST00000541304 ATG3Q9NT62 314 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 SMC4Q9NTJ3 1288 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 HYPKQ9NX55 129 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 IBTKQ9P2D0 1353 aaPredicted RBP7.3□□□□□ -1.24
CDKN3-206ENST00000541304 PXDNLA1KZ92 1463 aa7.3□□□□□ -1.24
CDKN3-206ENST00000541304 CNTNAP4Q9C0A0 1308 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 BTAF1O14981 1849 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 SBF2Q86WG5 1849 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 LOC102724428A0A0B4J2F2 783 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 DDX58O95786 925 aaKnown RBP7.29□□□□□ -1.24
CDKN3-206ENST00000541304 SIK1P57059 783 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 RAB15P59190 212 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 NPM2Q86SE8 214 aaKnown RBP7.29□□□□□ -1.24
CDKN3-206ENST00000541304 C8orf58Q8NAV2 365 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 ZNF784Q8NCA9 323 aaPredicted RBP7.29□□□□□ -1.24
CDKN3-206ENST00000541304 API5Q9BZZ5 524 aaKnown RBP7.29□□□□□ -1.24
CDKN3-206ENST00000541304 DDX21Q9NR30 783 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDKN3-206ENST00000541304 LY75O60449 1722 aa7.29□□□□□ -1.24
CDKN3-206ENST00000541304 RNF123Q5XPI4 1314 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 ESPNB1AK53 854 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 NEFLP07196 543 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 CANXP27824 592 aaKnown RBP7.28□□□□□ -1.24
CDKN3-206ENST00000541304 RELBQ01201 579 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 SLC39A6Q13433 755 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 PDE3AQ14432 1141 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 IL27Q8NEV9 243 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 ACSBG1Q96GR2 724 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 AGBL1Q96MI9 1066 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 TMPRSS4Q9NRS4 437 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 MIS18AQ9NYP9 233 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 ASAP1Q9ULH1 1129 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 RREB1Q92766 1687 aa7.28□□□□□ -1.24
CDKN3-206ENST00000541304 TJP1Q07157 1748 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 TNS1Q9HBL0 1735 aaKnown RBP7.27□□□□□ -1.25
CDKN3-206ENST00000541304 A0A087WZG4 1122 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 SENP3-EIF4A1A0A087X0R7 540 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 ZBBXA8MT70 800 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 ERVH48-1M5A8F1 160 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.25
CDKN3-206ENST00000541304 ADH1AP07327 375 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
CDKN3-206ENST00000541304 IL6STP40189 918 aaPredicted RBP7.27□□□□□ -1.25
CDKN3-206ENST00000541304 BAG6P46379 1132 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 RRP1P56182 461 aaKnown RBP7.27□□□□□ -1.25
CDKN3-206ENST00000541304 PTSQ03393 145 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 ZKSCAN2Q63HK3 967 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 TSPYL6Q8N831 410 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 CCNL1Q9UK58 526 aaPredicted RBP7.27□□□□□ -1.25
CDKN3-206ENST00000541304 CACNA1FO60840 1977 aa7.27□□□□□ -1.25
CDKN3-206ENST00000541304 FIGNL2A6NMB9 653 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 KCNQ2O43526 872 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 TRIM37O94972 964 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 CYP19A1P11511 503 aaPredicted RBP7.26□□□□□ -1.25
CDKN3-206ENST00000541304 ATF7IPQ6VMQ6 1270 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 FTSJ3Q8IY81 847 aaKnown RBP7.26□□□□□ -1.25
CDKN3-206ENST00000541304 FLAD1Q8NFF5 587 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 SSH1Q8WYL5 1049 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 POLMQ9NP87 494 aaPredicted RBP7.26□□□□□ -1.25
CDKN3-206ENST00000541304 CCDC87Q9NVE4 849 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 COL5A3P25940 1745 aaPredicted RBP7.26□□□□□ -1.25
CDKN3-206ENST00000541304 ATP10DQ9P241 1426 aa7.26□□□□□ -1.25
CDKN3-206ENST00000541304 ELL2O00472 640 aaPredicted RBP7.25□□□□□ -1.25
CDKN3-206ENST00000541304 SOCS7O14512 581 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 KCNQ3O43525 872 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 APBA3O96018 575 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 CTSOP43234 321 aaPredicted RBP7.25□□□□□ -1.25
CDKN3-206ENST00000541304 FLIIQ13045 1269 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 HSP90AB3PQ58FF7 597 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 RNF217Q8TC41 542 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 INSM2Q96T92 566 aaPredicted RBP7.25□□□□□ -1.25
CDKN3-206ENST00000541304 CHPF2Q9P2E5 772 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 PCDHB9Q9Y5E1 797 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 ABCC4O15439 1325 aa7.25□□□□□ -1.25
CDKN3-206ENST00000541304 C4BP0C0L5 1744 aa7.24□□□□□ -1.25
CDKN3-206ENST00000541304 ERVV-1B6SEH8 477 aa7.24□□□□□ -1.25
CDKN3-206ENST00000541304 LILRA1O75019 489 aa7.24□□□□□ -1.25
CDKN3-206ENST00000541304 FBXO45P0C2W1 286 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms