RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SHISA4Q96DD7 197 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 JAG2Q9Y219 1238 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 ZNF804BA4D1E1 1349 aa10.36□□□□□ -0.75
LRP6-204ENST00000540415 IGKV5-2P06315 115 aa10.36□□□□□ -0.75
LRP6-204ENST00000540415 CFAP100Q494V2 611 aa10.36□□□□□ -0.75
LRP6-204ENST00000540415 SLC17A8Q8NDX2 589 aa10.36□□□□□ -0.75
LRP6-204ENST00000540415 OPTNQ96CV9 577 aa10.36□□□□□ -0.75
LRP6-204ENST00000540415 PRMT6Q96LA8 375 aaPredicted RBP10.36□□□□□ -0.75
LRP6-204ENST00000540415 CDC5LQ99459 802 aaKnown RBP10.36□□□□□ -0.75
LRP6-204ENST00000540415 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
LRP6-204ENST00000540415 COL1A1P02452 1464 aaPredicted RBP10.36□□□□□ -0.75
LRP6-204ENST00000540415 HSP90B1P14625 803 aaKnown RBP10.35□□□□□ -0.75
LRP6-204ENST00000540415 IREB2P48200 963 aaKnown RBP10.35□□□□□ -0.75
LRP6-204ENST00000540415 MTFR1Q15390 333 aa10.35□□□□□ -0.75
LRP6-204ENST00000540415 TAF1CQ15572 869 aaPredicted RBP10.35□□□□□ -0.75
LRP6-204ENST00000540415 OTUD7BQ6GQQ9 843 aa10.35□□□□□ -0.75
LRP6-204ENST00000540415 FAM43AQ8N2R8 423 aa10.35□□□□□ -0.75
LRP6-204ENST00000540415 CD209Q9NNX6 404 aa10.35□□□□□ -0.75
LRP6-204ENST00000540415 CUL9Q8IWT3 2517 aa10.35□□□□□ -0.75
LRP6-204ENST00000540415 IRS2Q9Y4H2 1338 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 CCL15-CCL14A0A0B4J2E2 113 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 SOX1O00570 391 aaPredicted RBP10.34□□□□□ -0.75
LRP6-204ENST00000540415 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 RASA3Q14644 834 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 CCL15Q16663 113 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 CWF19L2Q2TBE0 894 aaKnown RBP10.34□□□□□ -0.75
LRP6-204ENST00000540415 SUPT20HL1Q3ZLR7 823 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.34□□□□□ -0.75
LRP6-204ENST00000540415 NBPF11Q86T75 865 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 ANKRD13AQ8IZ07 590 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 PRO3102Q9H379 93 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 MAP3K2Q9Y2U5 619 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 LEMD3Q9Y2U8 911 aa10.34□□□□□ -0.75
LRP6-204ENST00000540415 ZSWIM8A7E2V4 1837 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 TAF5LO75529 589 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 CTGFP29279 349 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 C8orf58Q8NAV2 365 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 HELBQ8NG08 1087 aaPredicted RBP10.33□□□□□ -0.76
LRP6-204ENST00000540415 DPF3Q92784 378 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 ZFYVE28Q9HCC9 887 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 PPP2R3BQ9Y5P8 575 aa10.33□□□□□ -0.76
LRP6-204ENST00000540415 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 ITGA6P23229 1130 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 IGHMBP2P38935 993 aaKnown RBP10.32□□□□□ -0.76
LRP6-204ENST00000540415 MMP14P50281 582 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 CHRNDQ07001 517 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 UBE3BQ7Z3V4 1068 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 LRCH3Q96II8 777 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 TEPSINQ96N21 525 aa10.32□□□□□ -0.76
LRP6-204ENST00000540415 SPEF2Q9C093 1822 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 UNCXA6NJT0 531 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 KCNJ4P48050 445 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 RBM5P52756 815 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRP6-204ENST00000540415 VGLL4Q14135 290 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 TMEM39BQ9GZU3 492 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 ANKRD2Q9GZV1 360 aa10.31□□□□□ -0.76
LRP6-204ENST00000540415 ZNF70Q9UC06 446 aaPredicted RBP10.31□□□□□ -0.76
LRP6-204ENST00000540415 LAMB1P07942 1786 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 NEURL1BA8MQ27 555 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 BTBD19C9JJ37 291 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 H7C1W4 665 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 MYO1BO43795 1136 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 LACTBP83111 547 aaPredicted RBP10.3□□□□□ -0.76
LRP6-204ENST00000540415 KSR2Q6VAB6 950 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 UBE2Q1Q7Z7E8 422 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 TSPYL6Q8N831 410 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 MPHOSPH8Q99549 860 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 TDRD3Q9H7E2 651 aaKnown RBP10.3□□□□□ -0.76
LRP6-204ENST00000540415 OTOFQ9HC10 1997 aa10.3□□□□□ -0.76
LRP6-204ENST00000540415 UNC80Q8N2C7 3258 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 TCP10L2B9ZVM9 353 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 TLR2O60603 784 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 DDX58O95786 925 aaKnown RBP10.29□□□□□ -0.76
LRP6-204ENST00000540415 IL1R1P14778 569 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 GTF2A2P52657 109 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 CASP7P55210 303 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 MAP3K9P80192 1104 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 ARHGEF6Q15052 776 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 SPDYE2Q495Y8 402 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 G2E3Q7L622 706 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.29□□□□□ -0.76
LRP6-204ENST00000540415 TRIM47Q96LD4 638 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
LRP6-204ENST00000540415 ZBTB7BO15156 539 aaPredicted RBP10.28□□□□□ -0.76
LRP6-204ENST00000540415 CACNB3P54284 484 aa10.28□□□□□ -0.76
LRP6-204ENST00000540415 GRIK5Q16478 980 aa10.28□□□□□ -0.76
LRP6-204ENST00000540415 CPA4Q9UI42 421 aa10.28□□□□□ -0.76
LRP6-204ENST00000540415 SNCAIPQ9Y6H5 919 aa10.28□□□□□ -0.76
LRP6-204ENST00000540415 SPDYE5A6NIY4 337 aa10.27□□□□□ -0.77
LRP6-204ENST00000540415 IRF6O14896 467 aa10.27□□□□□ -0.77
LRP6-204ENST00000540415 CSF1RP07333 972 aa10.27□□□□□ -0.77
LRP6-204ENST00000540415 CCL5P13501 91 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms