RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SLC20A2Q08357 652 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 HDAC5Q9UQL6 1122 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 RBM26Q5T8P6 1007 aaKnown RBP10.11□□□□□ -0.79
DDB1-217ENST00000540166 EYA3Q99504 573 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 SOS1Q07889 1333 aaPredicted RBP10.11□□□□□ -0.79
DDB1-217ENST00000540166 TOPAZ1Q8N9V7 1692 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 CLGNO14967 610 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 UBTFL1P0CB47 393 aaPredicted RBP10.11□□□□□ -0.79
DDB1-217ENST00000540166 MYOM1P52179 1685 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 RAD51AP2Q09MP3 1159 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 ARHGAP29Q52LW3 1261 aa10.11□□□□□ -0.79
DDB1-217ENST00000540166 IGHMBP2P38935 993 aaKnown RBP10.1□□□□□ -0.79
DDB1-217ENST00000540166 BRPF1P55201 1214 aaPredicted RBP10.1□□□□□ -0.79
DDB1-217ENST00000540166 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
DDB1-217ENST00000540166 ANO6Q4KMQ2 910 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 HSP90B2PQ58FF3 399 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 TYRO3Q06418 890 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 MYD88Q99836 296 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 H7C1D1 291 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 EIF5P55010 431 aaKnown RBP10.1□□□□□ -0.79
DDB1-217ENST00000540166 ZSCAN26Q16670 478 aa10.1□□□□□ -0.79
DDB1-217ENST00000540166 YBX3P16989 372 aaKnown RBP eCLIP10.09□□□□□ -0.792e-9■■□□□ 13.4
DDB1-217ENST00000540166 TTC31Q49AM3 519 aaPredicted RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 KMT5BQ4FZB7 885 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 INTS5Q6P9B9 1019 aaKnown RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 FBXO38Q6PIJ6 1188 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 ESYT1Q9BSJ8 1104 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 FEZ2Q9UHY8 353 aaPredicted RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 PTPRCP08575 1304 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 TPM1P09493 284 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 PRPF40BQ6NWY9 871 aaKnown RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 SECISBP2LQ93073 1101 aaKnown RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 MYCBPQ99417 103 aaPredicted RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 PRR5LQ6MZQ0 368 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 FERMT3Q86UX7 667 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 SMC1BQ8NDV3 1235 aa10.09□□□□□ -0.79
DDB1-217ENST00000540166 CDC5LQ99459 802 aaKnown RBP10.09□□□□□ -0.79
DDB1-217ENST00000540166 AK9Q5TCS8 1911 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 A0A1B0GUL7 405 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 URI1O94763 535 aaPredicted RBP10.08□□□□□ -0.8
DDB1-217ENST00000540166 DNM1Q05193 864 aaKnown RBP10.08□□□□□ -0.8
DDB1-217ENST00000540166 LARP1BQ659C4 914 aaKnown RBP10.08□□□□□ -0.8
DDB1-217ENST00000540166 TOMM70O94826 608 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 F13A1P00488 732 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 RASSF7Q02833 373 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 KCNF1Q9H3M0 494 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 NCAPD2Q15021 1401 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 MAP3K15Q6ZN16 1313 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 CASQ1P31415 396 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 SKIDA1Q1XH10 827 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 SPATA32Q96LK8 384 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
DDB1-217ENST00000540166 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 H3BQV1 296 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 CCP110O43303 1012 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 SMC2O95347 1197 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 PDCP20941 246 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 RBM5P52756 815 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDB1-217ENST00000540166 ANAPC15P60006 121 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 ERCC6LQ2NKX8 1250 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 IFFO2Q5TF58 517 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 OGFOD1Q8N543 542 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 CHPF2Q9P2E5 772 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 ZNF75DP51815 510 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 DDR1Q08345 913 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 TTLL7Q6ZT98 887 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 G2E3Q7L622 706 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 CCDC83Q8IWF9 413 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 NAT10Q9H0A0 1025 aaKnown RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 DDX21Q9NR30 783 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDB1-217ENST00000540166 ST7Q9NRC1 585 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 ZNF277Q9NRM2 450 aaPredicted RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 NRBP1Q9UHY1 535 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 LTN1O94822 1766 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 EIF4A1P60842 406 aaKnown RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 AXDND1Q5T1B0 1012 aaPredicted RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 SYT10Q6XYQ8 523 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 CNTROBQ8N137 903 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 RUFY2Q8WXA3 655 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 DDX19AQ9NUU7 478 aaKnown RBP10.07□□□□□ -0.8
DDB1-217ENST00000540166 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 AKAP12Q02952 1782 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 MON2Q7Z3U7 1717 aa10.07□□□□□ -0.8
DDB1-217ENST00000540166 PATL2C9JE40 543 aaKnown RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 PPEF1O14829 653 aaPredicted RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 IVLP07476 585 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 ZKSCAN1P17029 563 aaPredicted RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 CCDC73Q6ZRK6 1079 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms