RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 F13A1P00488 732 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 ZNF165P49910 485 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 PSMD2Q13200 908 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 SNCBQ16143 134 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 PLEKHO1Q53GL0 409 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 HHATQ5VTY9 493 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 CWF19L1Q69YN2 538 aaKnown RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 WDR93Q6P2C0 686 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 SLC30A9Q6PML9 568 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 NFXL1Q6ZNB6 911 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 FBXO22Q8NEZ5 403 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 ATL2Q8NHH9 583 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 BICD1Q96G01 975 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 PRAM1Q96QH2 718 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 PARD6BQ9BYG5 372 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 LNPKQ9C0E8 428 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 NAT10Q9H0A0 1025 aaKnown RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 OSBPL3Q9H4L5 887 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 VCPKMTQ9H867 229 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 ZCCHC17Q9NP64 241 aaKnown RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 KLC4Q9NSK0 619 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 CWC25Q9NXE8 425 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 UTP6Q9NYH9 597 aaKnown RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 GMEB1Q9Y692 573 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 ARHGEF5Q12774 1597 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 NEURL4Q96JN8 1562 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 KDM5AP29375 1690 aaKnown RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 URB2Q14146 1524 aaKnown RBP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 DUOX2Q9NRD8 1548 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 ABCA9Q8IUA7 1624 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 KIAA1210Q9ULL0 1709 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 SBNO2Q9Y2G9 1366 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 ZBTB7CA1YPR0 619 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 USP27XA6NNY8 438 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 PRPF6O94906 941 aaKnown RBP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 ATP5JP18859 108 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 SFPQP23246 707 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 LIG3P49916 1009 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 PPFIA1Q13136 1202 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 DYNC1I2Q13409 638 aaKnown RBP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 SF3A1Q15459 793 aaKnown RBP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 STX1AQ16623 288 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC144BQ3MJ40 725 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC178Q5BJE1 867 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 CMPK2Q5EBM0 449 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 ACBD5Q5T8D3 534 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 EMC10Q5UCC4 262 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 MTHFD1LQ6UB35 978 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 KCNV2Q8TDN2 545 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 BPIFA3Q9BQP9 254 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNHG1-211ENST00000539921 EBF2Q9HAK2 575 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 GOPCQ9HD26 462 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.01□□□□□ -1.292e-26■□□□□ 8.9
SNHG1-211ENST00000539921 SH3TC1Q8TE82 1336 aa7.01□□□□□ -1.29
SNHG1-211ENST00000539921 ENO4A6NNW6 628 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 EIF3HO15372 352 aaKnown RBP eCLIP7□□□□□ -1.29
SNHG1-211ENST00000539921 STX6O43752 255 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 SEC31AO94979 1220 aaKnown RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 SYT1P21579 422 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 NLRP6P59044 892 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 KRT85P78386 507 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 SKOR1P84550 965 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 PPP2R3AQ06190 1150 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 ACTN3Q08043 901 aaPredicted RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 RIPK1Q13546 671 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 LAMB3Q13751 1172 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 ANO6Q4KMQ2 910 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 NUGGCQ68CJ6 796 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 GIMAP6Q6P9H5 292 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 TRIM65Q6PJ69 517 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 CWC27Q6UX04 472 aaKnown RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 ARHGAP22Q7Z5H3 698 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 SRGAP1Q7Z6B7 1085 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 ITPRIPQ8IWB1 547 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 C1orf131Q8NDD1 294 aaKnown RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 TRIM58Q8NG06 486 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 ZNF526Q8TF50 670 aaPredicted RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 JAKMIP2Q96AA8 810 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 THOC1Q96FV9 657 aaKnown RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 MPHOSPH6Q99547 160 aaKnown RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 IRX2Q9BZI1 471 aaPredicted RBP7□□□□□ -1.29
SNHG1-211ENST00000539921 TNMDQ9H2S6 317 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 FAM204AQ9H8W3 233 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 PDE11AQ9HCR9 933 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 ABCA6Q8N139 1617 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 TTC21AQ8NDW8 1320 aa7□□□□□ -1.29
SNHG1-211ENST00000539921 A2MP01023 1474 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 ADCY10Q96PN6 1610 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 ARHGAP6O43182 974 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 MGRN1O60291 552 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 PENKP01210 267 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 PDCP20941 246 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms