RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DCAF5Q96JK2 942 aa23.67■■□□□ 1.38
TMEM260-203ENST00000539559 FMR1NBQ8N0W7 255 aaPredicted RBP23.67■■□□□ 1.38
TMEM260-203ENST00000539559 XPO4Q9C0E2 1151 aaKnown RBP23.67■■□□□ 1.38
TMEM260-203ENST00000539559 IFNKQ9P0W0 207 aa23.67■■□□□ 1.38
TMEM260-203ENST00000539559 HSPD1P10809 573 aaKnown RBP23.66■■□□□ 1.38
TMEM260-203ENST00000539559 TMC6Q7Z403 805 aa23.66■■□□□ 1.38
TMEM260-203ENST00000539559 PAG1Q9NWQ8 432 aa23.66■■□□□ 1.38
TMEM260-203ENST00000539559 PTPN21Q16825 1174 aa23.66■■□□□ 1.38
TMEM260-203ENST00000539559 TOM1L2Q6ZVM7 507 aa23.66■■□□□ 1.38
TMEM260-203ENST00000539559 MRPS27Q92552 414 aaKnown RBP23.66■■□□□ 1.38
TMEM260-203ENST00000539559 C5P01031 1676 aa23.66■■□□□ 1.38
TMEM260-203ENST00000539559 CYP27B1O15528 508 aa23.65■■□□□ 1.38
TMEM260-203ENST00000539559 NEMFO60524 1076 aa23.65■■□□□ 1.38
TMEM260-203ENST00000539559 E4F1Q66K89 784 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-203ENST00000539559 MORC2Q9Y6X9 1032 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-203ENST00000539559 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
TMEM260-203ENST00000539559 HSP90AB3PQ58FF7 597 aa23.65■■□□□ 1.38
TMEM260-203ENST00000539559 ZNF397Q8NF99 534 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-203ENST00000539559 SALL1Q9NSC2 1324 aa23.64■■□□□ 1.38
TMEM260-203ENST00000539559 SF3A1Q15459 793 aaKnown RBP23.64■■□□□ 1.38
TMEM260-203ENST00000539559 ARMCX5Q6P1M9 558 aa23.64■■□□□ 1.38
TMEM260-203ENST00000539559 LRP10Q7Z4F1 713 aa23.64■■□□□ 1.38
TMEM260-203ENST00000539559 ZNF594Q96JF6 807 aaPredicted RBP23.64■■□□□ 1.38
TMEM260-203ENST00000539559 MYH15Q9Y2K3 1946 aa23.64■■□□□ 1.37
TMEM260-203ENST00000539559 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
TMEM260-203ENST00000539559 SLFN14P0C7P3 912 aa23.64■■□□□ 1.37
TMEM260-203ENST00000539559 SYT10Q6XYQ8 523 aa23.63■■□□□ 1.37
TMEM260-203ENST00000539559 SH3TC1Q8TE82 1336 aa23.63■■□□□ 1.37
TMEM260-203ENST00000539559 HMGB1P09429 215 aaKnown RBP23.63■■□□□ 1.37
TMEM260-203ENST00000539559 STK38Q15208 465 aa23.63■■□□□ 1.37
TMEM260-203ENST00000539559 MAST3O60307 1309 aa23.63■■□□□ 1.37
TMEM260-203ENST00000539559 M0R2C6 588 aa23.62■■□□□ 1.37
TMEM260-203ENST00000539559 ERCC6LQ2NKX8 1250 aa23.62■■□□□ 1.37
TMEM260-203ENST00000539559 RABL6Q3YEC7 729 aaPredicted RBP23.62■■□□□ 1.37
TMEM260-203ENST00000539559 GORABQ5T7V8 394 aa23.62■■□□□ 1.37
TMEM260-203ENST00000539559 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
TMEM260-203ENST00000539559 SLU7O95391 586 aaKnown RBP23.61■■□□□ 1.37
TMEM260-203ENST00000539559 LRRC24Q50LG9 513 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 ERO1AQ96HE7 468 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 KIAA1468Q9P260 1216 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 PKD1L3Q7Z443 1732 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 LINC00301Q8NCQ3 95 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 PPP1R13BQ96KQ4 1090 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 NAT10Q9H0A0 1025 aaKnown RBP23.61■■□□□ 1.37
TMEM260-203ENST00000539559 ZNF446Q9NWS9 450 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 NHSL1Q5SYE7 1610 aa23.61■■□□□ 1.37
TMEM260-203ENST00000539559 LMOD1P29536 600 aaPredicted RBP23.6■■□□□ 1.37
TMEM260-203ENST00000539559 ZRSR1Q15695 479 aaKnown RBP23.6■■□□□ 1.37
TMEM260-203ENST00000539559 ATG9AQ7Z3C6 839 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 AGXT2Q9BYV1 514 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 ZMYM1Q5SVZ6 1142 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 ADALQ6DHV7 355 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 KRT222Q8N1A0 295 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 DSCC1Q9BVC3 393 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 NEDD4P46934 1319 aa23.6■■□□□ 1.37
TMEM260-203ENST00000539559 GOLGA8FQ08AF8 430 aa23.59■■□□□ 1.37
TMEM260-203ENST00000539559 GOLGA8DPQ0D2H9 430 aa23.59■■□□□ 1.37
TMEM260-203ENST00000539559 RTEL1Q9NZ71 1219 aa23.59■■□□□ 1.37
TMEM260-203ENST00000539559 A0A0U1RQG5 324 aaPredicted RBP23.59■■□□□ 1.37
TMEM260-203ENST00000539559 ATP1A3P13637 1013 aa23.59■■□□□ 1.37
TMEM260-203ENST00000539559 FKBP4Q02790 459 aaKnown RBP eCLIP23.59■■□□□ 1.37
TMEM260-203ENST00000539559 KIF28PB7ZC32 967 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 MARCKSP29966 332 aaPredicted RBP23.58■■□□□ 1.37
TMEM260-203ENST00000539559 TTC5Q8N0Z6 440 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 OSBP2Q969R2 916 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 HELLSQ9NRZ9 838 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 CASP7P55210 303 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 CABP4P57796 275 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 EVA1CP58658 441 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 ZCRB1Q8TBF4 217 aaKnown RBP23.58■■□□□ 1.37
TMEM260-203ENST00000539559 C8orf76Q96K31 380 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 CARD10Q9BWT7 1032 aa23.58■■□□□ 1.37
TMEM260-203ENST00000539559 OSBPL5Q9H0X9 879 aaPredicted RBP23.58■■□□□ 1.37
TMEM260-203ENST00000539559 ABCA3Q99758 1704 aa23.58■■□□□ 1.36
TMEM260-203ENST00000539559 IFIT1P09914 478 aaKnown RBP23.57■■□□□ 1.36
TMEM260-203ENST00000539559 FOXO4P98177 505 aa23.57■■□□□ 1.36
TMEM260-203ENST00000539559 PUS3Q9BZE2 481 aaKnown RBP23.57■■□□□ 1.36
TMEM260-203ENST00000539559 PALLDQ8WX93 1383 aa23.57■■□□□ 1.36
TMEM260-203ENST00000539559 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
TMEM260-203ENST00000539559 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
TMEM260-203ENST00000539559 GSDMDP57764 484 aa23.57■■□□□ 1.36
TMEM260-203ENST00000539559 GABPB1Q06547 395 aaPredicted RBP23.57■■□□□ 1.36
TMEM260-203ENST00000539559 ZNF274Q96GC6 653 aaPredicted RBP23.57■■□□□ 1.36
TMEM260-203ENST00000539559 ZNF202O95125 648 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 SNRPA1P09661 255 aaKnown RBP23.56■■□□□ 1.36
TMEM260-203ENST00000539559 SFPQP23246 707 aaKnown RBP eCLIP23.56■■□□□ 1.36
TMEM260-203ENST00000539559 TERF2Q15554 542 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 AIFM3Q96NN9 605 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 AFDNP55196 1824 aaKnown RBP23.56■■□□□ 1.36
TMEM260-203ENST00000539559 RFX7Q2KHR2 1363 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 SPTLC2O15270 562 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 SLC3A2P08195 630 aaKnown RBP23.56■■□□□ 1.36
TMEM260-203ENST00000539559 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 ORC3Q9UBD5 711 aaPredicted RBP23.56■■□□□ 1.36
TMEM260-203ENST00000539559 KLF18A0A0U1RQI7 1052 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 ERICH4A6NGS2 130 aa23.56■■□□□ 1.36
TMEM260-203ENST00000539559 GOLGA8BA8MQT2 603 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 IL2RBP14784 551 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 NCAPHQ15003 741 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 CCDC85AQ96PX6 553 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms