RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 PRKAG2Q9UGJ0 569 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 MEGF11A6BM72 1044 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 KIF4AO95239 1232 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 ACPPP15309 386 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 FAM26DQ5JW98 314 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 CEP120Q8N960 986 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 BCANQ96GW7 911 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 SLC38A3Q99624 504 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 KANSL3Q9P2N6 904 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 SLC5A6Q9Y289 635 aa4.6□□□□□ -1.67
CBX3P4-201ENST00000538909 TRPA1O75762 1119 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 TIAF1O95411 115 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 ARL4DP49703 201 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 C19orf57Q0VDD7 668 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 DUSP27Q5VZP5 1158 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 SMG8Q8ND04 991 aaKnown RBP4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 BCL7CQ8WUZ0 217 aaPredicted RBP4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 TMPRSS13Q9BYE2 586 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 SAP130Q9H0E3 1048 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 CYP4F12Q9HCS2 524 aa4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 ABI2Q9NYB9 513 aaPredicted RBP4.59□□□□□ -1.67
CBX3P4-201ENST00000538909 DLGAP3O95886 979 aa4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 FKBP5Q13451 457 aaPredicted RBP4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 KANK4Q5T7N3 995 aaPredicted RBP4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 LILRA6Q6PI73 481 aa4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 ZNF765Q7L2R6 523 aa4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 SPRED2Q7Z698 418 aa4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 GPR152Q8TDT2 470 aa4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 HHIPQ96QV1 700 aa4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 RC3H2Q9HBD1 1191 aaKnown RBP4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.58□□□□□ -1.68
CBX3P4-201ENST00000538909 NCANO14594 1321 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 LOC100289279A0A1B0GTE1 492 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 PRRG2O14669 202 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 RAB6AP20340 208 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 BRD2P25440 801 aaKnown RBP4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 BNIP3Q12983 259 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 C2CD4AQ8NCU7 369 aaPredicted RBP4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 GATA6Q92908 595 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 ARXQ96QS3 562 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 YIPF2Q9BWQ6 316 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 SUGCTQ9HAC7 445 aa4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 FNDC3AQ9Y2H6 1198 aaKnown RBP4.57□□□□□ -1.68
CBX3P4-201ENST00000538909 FAM196BA6NMK8 535 aa4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 B8ZZF3 427 aa4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 PDE2AO00408 941 aaPredicted RBP4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 UBTFP17480 764 aaKnown RBP4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 BUD31P41223 144 aaPredicted RBP4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 ATG4DQ86TL0 474 aaPredicted RBP4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 WFDC3Q8IUB2 231 aa4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 PRIMPOLQ96LW4 560 aa4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 FAM13BQ9NYF5 915 aa4.56□□□□□ -1.68
CBX3P4-201ENST00000538909 SOX1O00570 391 aaPredicted RBP4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 NFICP08651 508 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 ZAP70P43403 619 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 SOX4Q06945 474 aaPredicted RBP4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 IKBKEQ14164 716 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 C16orf46Q6P387 395 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 GLIS3Q8NEA6 775 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 TMEM40Q8WWA1 233 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 GLMNQ92990 594 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 VRTNQ9H8Y1 702 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 TMEM63CQ9P1W3 806 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 SOX13Q9UN79 622 aa4.55□□□□□ -1.68
CBX3P4-201ENST00000538909 NFKBIEO00221 500 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 RNASE1P07998 156 aaKnown RBP4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 CYP27A1Q02318 531 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 MESP2Q0VG99 397 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 STK11IPQ8N1F8 1099 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 EZH1Q92800 747 aaPredicted RBP4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 FAM84AQ96KN4 292 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 ELP3Q9H9T3 547 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 MBNL3Q9NUK0 354 aaKnown RBP4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 DZANK1Q9NVP4 752 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 CNTN3Q9P232 1028 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 ADAMTS6Q9UKP5 1117 aa4.54□□□□□ -1.68
CBX3P4-201ENST00000538909 LRRC10BA6NIK2 292 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 TNFRSF10BO14763 440 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 PRMT3O60678 531 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 CFPP27918 469 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 CD96P40200 585 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 RAP1GAPP47736 663 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 MAP7Q14244 749 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 EXOSC6Q5RKV6 272 aaKnown RBP4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 LCNL1Q6ZST4 164 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 ZNF438Q7Z4V0 828 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 LRRN4CLQ8ND94 238 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 FAM200AQ8TCP9 573 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 TOX2Q96NM4 488 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 MKNK1Q9BUB5 465 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 LGR6Q9HBX8 967 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 ACTL7BQ9Y614 415 aa4.53□□□□□ -1.68
CBX3P4-201ENST00000538909 ZBTB39O15060 712 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 CD8BP10966 210 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 ADH5P11766 374 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 FUT4P22083 530 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 CES1P23141 567 aa4.52□□□□□ -1.69
CBX3P4-201ENST00000538909 LMOD1P29536 600 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms