RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 GIPRP48546 466 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 AMPD3Q01432 767 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 PLEKHG6Q3KR16 790 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 KIAA0907Q7Z7F0 614 aaPredicted RBP12.23□□□□□ -0.45
CD9-207ENST00000538418 LINC00528Q8N1L1 170 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
CD9-207ENST00000538418 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 ST7Q9NRC1 585 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 ACTR10Q9NZ32 417 aa12.23□□□□□ -0.45
CD9-207ENST00000538418 ENC1O14682 589 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 PDPK1O15530 556 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 TARSP26639 723 aaKnown RBP12.22□□□□□ -0.45
CD9-207ENST00000538418 GYS2P54840 703 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 RPS26P62854 115 aaKnown RBP12.22□□□□□ -0.45
CD9-207ENST00000538418 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 TRIM42Q8IWZ5 723 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 CNTNAP3BQ96NU0 1288 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 OSMRQ99650 979 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 LRRC3Q9BY71 257 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 CNTNAP3Q9BZ76 1288 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 CRISPLD1Q9H336 500 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 TMEM260Q9NX78 707 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 DDX56Q9NY93 547 aaKnown RBP12.22□□□□□ -0.45
CD9-207ENST00000538418 SUGT1Q9Y2Z0 365 aa12.22□□□□□ -0.45
CD9-207ENST00000538418 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.45
CD9-207ENST00000538418 UPP2O95045 317 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 KCNQ4P56696 695 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 RASGRF1Q13972 1273 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 SAMD5Q5TGI4 173 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 IRF2BPLQ9H1B7 796 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 DZANK1Q9NVP4 752 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.45
CD9-207ENST00000538418 ARHGEF11O15085 1522 aa12.21□□□□□ -0.46
CD9-207ENST00000538418 SOGA1O94964 1423 aa12.2□□□□□ -0.46
CD9-207ENST00000538418 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
CD9-207ENST00000538418 GRIA4P48058 902 aa12.2□□□□□ -0.46
CD9-207ENST00000538418 TAF7LQ5H9L4 462 aa12.2□□□□□ -0.46
CD9-207ENST00000538418 FERD3LQ96RJ6 166 aa12.2□□□□□ -0.46
CD9-207ENST00000538418 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
CD9-207ENST00000538418 MAPK8IP1Q9UQF2 711 aa12.2□□□□□ -0.46
CD9-207ENST00000538418 KIF4AO95239 1232 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 F13A1P00488 732 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 RHOQP17081 205 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 ITPKAP23677 461 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 MCM4P33991 863 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 CCINQ13939 588 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 OR6P1Q8NGX9 317 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 FBXO27Q8NI29 283 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 GSX2Q9BZM3 304 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 POLA1P09884 1462 aaPredicted RBP12.19□□□□□ -0.46
CD9-207ENST00000538418 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
CD9-207ENST00000538418 TRIM37O94972 964 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 RARAP10276 462 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 ACPPP15309 386 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 FBXW10Q5XX13 1052 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 BNC2Q6ZN30 1099 aaPredicted RBP12.18□□□□□ -0.46
CD9-207ENST00000538418 C16orf86Q6ZW13 317 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 CCDC84Q86UT8 332 aaPredicted RBP12.18□□□□□ -0.46
CD9-207ENST00000538418 NLRP8Q86W28 1048 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 RUBCNLQ9H714 662 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
CD9-207ENST00000538418 ZNF165P49910 485 aa12.17□□□□□ -0.46
CD9-207ENST00000538418 SQSTM1Q13501 440 aa12.17□□□□□ -0.46
CD9-207ENST00000538418 GATAD2BQ8WXI9 593 aa12.17□□□□□ -0.46
CD9-207ENST00000538418 FEZ1Q99689 392 aa12.17□□□□□ -0.46
CD9-207ENST00000538418 GPAMQ9HCL2 828 aa12.17□□□□□ -0.46
CD9-207ENST00000538418 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
CD9-207ENST00000538418 PAGE1O75459 146 aa12.16□□□□□ -0.46
CD9-207ENST00000538418 SMPD1P17405 629 aa12.16□□□□□ -0.46
CD9-207ENST00000538418 LMNB1P20700 586 aa12.16□□□□□ -0.46
CD9-207ENST00000538418 MPP2Q14168 576 aa12.16□□□□□ -0.46
CD9-207ENST00000538418 SPRED3Q2MJR0 410 aa12.16□□□□□ -0.46
CD9-207ENST00000538418 CWF19L2Q2TBE0 894 aaKnown RBP12.16□□□□□ -0.46
CD9-207ENST00000538418 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
CD9-207ENST00000538418 ZFATQ9P243 1243 aa12.16□□□□□ -0.46
CD9-207ENST00000538418 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
CD9-207ENST00000538418 PSAPP07602 524 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 BMP2P12643 396 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 MASP1P48740 699 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 HYAL2Q12891 473 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 FXNQ16595 210 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 PGBD3Q8N328 593 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 PLD4Q96BZ4 506 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 LEMD3Q9Y2U8 911 aa12.15□□□□□ -0.46
CD9-207ENST00000538418 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.46
CD9-207ENST00000538418 WDR97A6NE52 1622 aa12.15□□□□□ -0.47
CD9-207ENST00000538418 FAM221AA4D161 298 aa12.14□□□□□ -0.47
CD9-207ENST00000538418 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
CD9-207ENST00000538418 TRPA1O75762 1119 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms