RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DPH6Q7L8W6 267 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 ATF5Q9Y2D1 282 aaPredicted RBP6.14□□□□□ -1.43
LRP6-203ENST00000538239 MLH3Q9UHC1 1453 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 MCM7P33993 719 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 GTF2IP78347 998 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 HSP90AA2PQ14568 343 aaPredicted RBP6.14□□□□□ -1.43
LRP6-203ENST00000538239 DLGAP5Q15398 846 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 FLAD1Q8NFF5 587 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 LRRC27Q9C0I9 530 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 GRPEL1Q9HAV7 217 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 PLEKHG3A1L390 1219 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 GOLGA6L10A6NI86 522 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 MARCKSP29966 332 aaPredicted RBP6.14□□□□□ -1.43
LRP6-203ENST00000538239 DPY19L2Q6NUT2 758 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 TCHPQ9BT92 498 aa6.14□□□□□ -1.43
LRP6-203ENST00000538239 RLBP1P12271 317 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 WDR66Q8TBY9 1149 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TGFBRAP1Q8WUH2 860 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 NDUFB9Q9Y6M9 179 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 PTPDC1A2A3K4 754 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TOP1P11387 765 aaKnown RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 NCBP1Q09161 790 aaKnown RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 FAM196AQ6ZSG2 479 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TAX1BP1Q86VP1 789 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 HOMER2Q9NSB8 354 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 FCHSD1Q86WN1 690 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 MAPKAPK5Q8IW41 473 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 PLIN2Q99541 437 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 DBNDD2Q9BQY9 259 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 IVNS1ABPQ9Y6Y0 642 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 SOS1Q07889 1333 aaPredicted RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 GBP2P32456 591 aaPredicted RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 CTSWP56202 376 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 EIF4A1P60842 406 aaKnown RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 CREB3L3Q68CJ9 461 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 ZNF354CQ86Y25 554 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TBC1D2Q9BYX2 928 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 NOD1Q9Y239 953 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 B4E1Z4 1266 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 MYCLP12524 364 aaPredicted RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 CRKLP46109 303 aaKnown RBP6.13□□□□□ -1.43
LRP6-203ENST00000538239 RRAGBQ5VZM2 374 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TMX3Q96JJ7 454 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 TRIM47Q96LD4 638 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 CTDSPL2Q05D32 466 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 GCKRQ14397 625 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 MROH5Q6ZUA9 1318 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 ERCC6L2Q5T890 1561 aa6.13□□□□□ -1.43
LRP6-203ENST00000538239 CHMP2AO43633 222 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 TTLL7Q6ZT98 887 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 SPATA5Q8NB90 893 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 PYM1Q9BRP8 204 aaKnown RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 SYNCQ9H7C4 482 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 LOC102724428A0A0B4J2F2 783 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 FAM13AO94988 1023 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 CTNNA2P26232 953 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 SCNN1DP51172 638 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 SIK1P57059 783 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 USH1GQ495M9 461 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 FAM114A1Q8IWE2 563 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 LPIN2Q92539 896 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 HELLSQ9NRZ9 838 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 ASAP1Q9ULH1 1129 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 CTAGE5O15320 804 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 SYKP43405 635 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 CCDC102BQ68D86 513 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 FNBP4Q8N3X1 1017 aaPredicted RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.12□□□□□ -1.43
LRP6-203ENST00000538239 USP40Q9NVE5 1235 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 TTF2Q9UNY4 1162 aaKnown RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 PRDM1O75626 825 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 IQCEQ6IPM2 695 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 GOPCQ9HD26 462 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 BABAM1Q9NWV8 329 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 PREX2Q70Z35 1606 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 ASIC1P78348 528 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 KANK3Q6NY19 840 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 SEPT12Q8IYM1 358 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 CPXCR1Q8N123 301 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 TNPO1Q92973 898 aaKnown RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 UIMC1Q96RL1 719 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 GPHNQ9NQX3 736 aaPredicted RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 RBM28Q9NW13 759 aaKnown RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 TRIM35Q9UPQ4 493 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 DDX39AO00148 427 aaKnown RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 KRT13P13646 458 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 DHX58Q96C10 678 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 DCPSQ96C86 337 aaKnown RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 HOOK2Q96ED9 719 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 YEATS4O95619 227 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 STX1AQ16623 288 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 HSP90AA4PQ58FG1 418 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 UNC5CLQ8IV45 518 aa6.12□□□□□ -1.43
LRP6-203ENST00000538239 ZSCAN16Q9H4T2 348 aaPredicted RBP6.12□□□□□ -1.43
LRP6-203ENST00000538239 SHROOM2Q13796 1616 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 RPS8P62241 208 aaKnown RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 SMCR8Q8TEV9 937 aaPredicted RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 PSMD1Q99460 953 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms