RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 PI4KAP2A4QPH2 592 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 DDB1Q16531 1140 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 GORABQ5T7V8 394 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 PI4KAP1Q8N8J0 262 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 PIGBQ92521 554 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 AOX1Q06278 1338 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 SPATA31A6Q5VVP1 1343 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 BECN2A8MW95 431 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 GNAI3P08754 354 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 MYL6BP14649 208 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 C11orf57Q6ZUT1 292 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 CCDC150Q8NCX0 1101 aa13.18□□□□□ -0.3
SEMA4D-221ENST00000537934 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 CORO7P57737 925 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 STX1AQ16623 288 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 FUT8Q9BYC5 575 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 KCPQ6ZWJ8 1503 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 ITGB4P16144 1822 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 SGSM2O43147 1006 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 CCP110O43303 1012 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 PDCP20941 246 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 MCTP2Q6DN12 878 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 CXorf56Q9H5V9 222 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 DDX21Q9NR30 783 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
SEMA4D-221ENST00000537934 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 ADCY9O60503 1353 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 CPP00450 1065 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 EVCP57679 992 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 ST3GAL1Q11201 340 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 DHX40Q8IX18 779 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 FNBP4Q8N3X1 1017 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 NBPF11Q86T75 865 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 CARD6Q9BX69 1037 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 MKRN1Q9UHC7 482 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 USP21Q9UK80 565 aa13.16□□□□□ -0.3
SEMA4D-221ENST00000537934 CTAGE5O15320 804 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 NRDCO43847 1150 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 KIF1CO43896 1103 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 CDCA7Q9BWT1 371 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 ZSCAN16Q9H4T2 348 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 EP400Q96L91 3159 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 H3BQF6 201 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-221ENST00000537934 A0A0G2JS52 829 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 URI1O94763 535 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 SMC2O95347 1197 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 CPA1P15085 419 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 VPS72Q15906 364 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 MAP2K7O14733 419 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 ME3Q16798 604 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 TRIM65Q6PJ69 517 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 DOT1LQ8TEK3 1739 aa13.14□□□□□ -0.31
SEMA4D-221ENST00000537934 DTNBO60941 627 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 GNAI2P04899 355 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
SEMA4D-221ENST00000537934 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms