RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 DEFB118Q96PH6 123 aa12.74□□□□□ -0.37
CPSF7-217ENST00000537162 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
CPSF7-217ENST00000537162 TRMT112Q9UI30 125 aaKnown RBP12.74□□□□□ -0.37
CPSF7-217ENST00000537162 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
CPSF7-217ENST00000537162 SH3TC1Q8TE82 1336 aa12.73□□□□□ -0.37
CPSF7-217ENST00000537162 UBXN2AP68543 259 aa12.73□□□□□ -0.37
CPSF7-217ENST00000537162 ZNF697Q5TEC3 545 aa12.73□□□□□ -0.37
CPSF7-217ENST00000537162 ECM29Q5VYK3 1845 aa12.73□□□□□ -0.37
CPSF7-217ENST00000537162 COL3A1P02461 1466 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-217ENST00000537162 AOX1Q06278 1338 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 DDX60LQ5H9U9 1706 aaKnown RBP12.72□□□□□ -0.37
CPSF7-217ENST00000537162 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 PRKCZQ05513 592 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
CPSF7-217ENST00000537162 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 OGFOD1Q8N543 542 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 SEMA6BQ9H3T3 888 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 CPA4Q9UI42 421 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 GABRQQ9UN88 632 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 MGAMO43451 1857 aa12.72□□□□□ -0.37
CPSF7-217ENST00000537162 U2SURPO15042 1029 aaKnown RBP12.71□□□□□ -0.37
CPSF7-217ENST00000537162 IREB2P48200 963 aaKnown RBP12.71□□□□□ -0.37
CPSF7-217ENST00000537162 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.37
CPSF7-217ENST00000537162 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.37
CPSF7-217ENST00000537162 C17orf99Q6UX52 265 aa12.71□□□□□ -0.37
CPSF7-217ENST00000537162 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
CPSF7-217ENST00000537162 FBXW7Q969H0 707 aa12.71□□□□□ -0.37
CPSF7-217ENST00000537162 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
CPSF7-217ENST00000537162 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.37
CPSF7-217ENST00000537162 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-217ENST00000537162 ANXA1P04083 346 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 ELNP15502 786 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 GTF2A2P52657 109 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-217ENST00000537162 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-217ENST00000537162 PODNQ7Z5L7 613 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 KIAA0825Q8IV33 1275 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 TTYH1Q9H313 450 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-217ENST00000537162 SEC31BQ9NQW1 1179 aa12.7□□□□□ -0.38
CPSF7-217ENST00000537162 BDP1A6H8Y1 2624 aa12.69□□□□□ -0.38
CPSF7-217ENST00000537162 INHAP05111 366 aa12.69□□□□□ -0.38
CPSF7-217ENST00000537162 PDIA6Q15084 440 aa12.69□□□□□ -0.38
CPSF7-217ENST00000537162 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-217ENST00000537162 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
CPSF7-217ENST00000537162 FOSL2P15408 326 aa12.68□□□□□ -0.38
CPSF7-217ENST00000537162 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
CPSF7-217ENST00000537162 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
CPSF7-217ENST00000537162 ZNF804BA4D1E1 1349 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 HOXD10P28358 340 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
CPSF7-217ENST00000537162 VGLL4Q14135 290 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-217ENST00000537162 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 RTL5Q5HYW3 569 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-217ENST00000537162 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-217ENST00000537162 CACNA1AO00555 2505 aa12.67□□□□□ -0.38
CPSF7-217ENST00000537162 FAM205AQ6ZU69 1335 aa12.66□□□□□ -0.38
CPSF7-217ENST00000537162 ADCY3O60266 1144 aa12.66□□□□□ -0.38
CPSF7-217ENST00000537162 ADAMTS19Q8TE59 1207 aa12.66□□□□□ -0.38
CPSF7-217ENST00000537162 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-217ENST00000537162 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
CPSF7-217ENST00000537162 STRIP1Q5VSL9 837 aa12.65□□□□□ -0.38
CPSF7-217ENST00000537162 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
CPSF7-217ENST00000537162 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
CPSF7-217ENST00000537162 MYO3BQ8WXR4 1341 aa12.64□□□□□ -0.39
CPSF7-217ENST00000537162 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
CPSF7-217ENST00000537162 RASA3Q14644 834 aa12.64□□□□□ -0.39
CPSF7-217ENST00000537162 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-217ENST00000537162 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
CPSF7-217ENST00000537162 PFASO15067 1338 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 SPEF2Q9C093 1822 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 CETPP11597 493 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 DLGAP5Q15398 846 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 HELBQ8NG08 1087 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-217ENST00000537162 LRFN3Q9BTN0 628 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 C11orf49Q9H6J7 331 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
CPSF7-217ENST00000537162 ZCCHC17Q9NP64 241 aaKnown RBP12.63□□□□□ -0.39
CPSF7-217ENST00000537162 XDHP47989 1333 aa12.62□□□□□ -0.39
CPSF7-217ENST00000537162 WDHD1O75717 1129 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-217ENST00000537162 FLT3LGP49771 235 aa12.62□□□□□ -0.39
CPSF7-217ENST00000537162 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
CPSF7-217ENST00000537162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPSF7-217ENST00000537162 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
CPSF7-217ENST00000537162 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-217ENST00000537162 NECAB3Q96P71 396 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-217ENST00000537162 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-217ENST00000537162 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■■■□□ 15.8
CPSF7-217ENST00000537162 HCN4Q9Y3Q4 1203 aa12.62□□□□□ -0.39
CPSF7-217ENST00000537162 DNAH12Q6ZR08 3092 aa12.62□□□□□ -0.39
CPSF7-217ENST00000537162 PIEZO1Q92508 2521 aa12.61□□□□□ -0.39
CPSF7-217ENST00000537162 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms