RNA–Protein interactions for RNA: ENST00000534793.1

TTC12-222, Transcript of tetratricopeptide repeat domain 12, human

TSL 5

Gene TTC12, Length 342 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC12-222	ENST00000534793	MPND	Q8N594	471 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	RGS22	Q8NE09	1264 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	RTF1	Q92541	710 aa	Known RBP	5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	CDK15	Q96Q40	435 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	VRTN	Q9H8Y1	702 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	MBIP	Q9NS73	344 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	DDX41	Q9UJV9	622 aa	Known RBP	5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	HDAC5	Q9UQL6	1122 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	PCDHB11	Q9Y5F2	797 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	TLL2	Q9Y6L7	1015 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	WASF2	Q9Y6W5	498 aa		5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.82	□□□□□ -1.48
TTC12-222	ENST00000534793	RFX7	Q2KHR2	1363 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	NPHP3	Q7Z494	1330 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	USP42	Q9H9J4	1324 aa	Known RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	TTC24	A2A3L6	582 aa	Predicted RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	ATP5J2-PTCD1	G3V325	749 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	CTAGE5	O15320	804 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	ALDH1A1	P00352	501 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	F13A1	P00488	732 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	NR5A1	Q13285	461 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	NCOA4	Q13772	614 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	ATL3	Q6DD88	541 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	DEPDC4	Q8N2C3	294 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	AFAP1	Q8N556	730 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	ZGPAT	Q8N5A5	531 aa	Known RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	ZNF397	Q8NF99	534 aa	Predicted RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	TDRD7	Q8NHU6	1098 aa	Known RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	RUFY2	Q8WXA3	655 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	KCNB2	Q92953	911 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	DNAJC2	Q99543	621 aa	Known RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	NOD1	Q9Y239	953 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	NRXN3	Q9Y4C0	1643 aa		5.81	□□□□□ -1.48
TTC12-222	ENST00000534793	KDM3B	Q7LBC6	1761 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	SLIT1	O75093	1534 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	HIP1	O00291	1037 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CHL1	O00533	1208 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	STX6	O43752	255 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	RGS20	O76081	388 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	GNAI2	P04899	355 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	TPM1	P09493	284 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CSB-PGBD3	P0DP91	1061 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CHML	P26374	656 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	IL13	P35225	146 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	ATP1A2	P50993	1020 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	GSDMD	P57764	484 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	TUBB4B	P68371	445 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	RBM6	P78332	1123 aa	Known RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	SRPK2	P78362	688 aa	Known RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	USP4	Q13107	963 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	ANKRD1	Q15327	319 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	MAP3K11	Q16584	847 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	INTS6L	Q5JSJ4	861 aa	Known RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	VPS53	Q5VIR6	699 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CTR9	Q6PD62	1173 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	LARP1	Q6PKG0	1096 aa	Known RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	USP48	Q86UV5	1035 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CCDC116	Q8IYX3	515 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CYP4X1	Q8N118	509 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	PHTF2	Q8N3S3	785 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CCDC112	Q8NEF3	446 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	SNIP1	Q8TAD8	396 aa	Known RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	EMID1	Q96A84	441 aa	Predicted RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	ERO1A	Q96HE7	468 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	MRFAP1L1	Q96HT8	127 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	SRRT	Q9BXP5	876 aa	Known RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	LRRCC1	Q9C099	1032 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	PGPEP1	Q9NXJ5	209 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	FAM53C	Q9NYF3	392 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	POLK	Q9UBT6	870 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	CTNNA3	Q9UI47	895 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	LIMCH1	Q9UPQ0	1083 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793		V9GYY5	206 aa	Predicted RBP	5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	SPEF2	Q9C093	1822 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	KDR	P35968	1356 aa		5.8	□□□□□ -1.48
TTC12-222	ENST00000534793	TTC41P	Q6P2S7	1318 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	PHRF1	Q9P1Y6	1649 aa	Known RBP	5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	MYO1B	O43795	1136 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	RASA1	P20936	1047 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	KRT85	P78386	507 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	PSME1	Q06323	249 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	NCBP1	Q09161	790 aa	Known RBP	5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	PKP1	Q13835	747 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	TIGD1	Q96MW7	591 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	TTC14	Q96N46	770 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	MKRN1	Q9UHC7	482 aa	Known RBP	5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	OVOS2	A0A0J9YW53	1432 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	OVOS2	Q6IE36	1432 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	SBNO1	A3KN83	1393 aa		5.79	□□□□□ -1.48
TTC12-222	ENST00000534793	OVOS2	A0A0G2JMS6	1433 aa		5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	SIAH2	O43255	324 aa		5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	HOXB7	P09629	217 aa		5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	CDK11B	P21127	795 aa	Known RBP	5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	CRB1	P82279	1406 aa		5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	MUM1L1	Q5H9M0	696 aa		5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	TEX35	Q5T0J7	233 aa		5.78	□□□□□ -1.48
TTC12-222	ENST00000534793	PLA2G4D	Q86XP0	818 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms