RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 MCM2P49736 904 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 PTH1RQ03431 593 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 PUM3Q15397 648 aaKnown RBP7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 LRRFIP1Q32MZ4 808 aaKnown RBP7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 DDX46Q7L014 1031 aaKnown RBP7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 LPIN2Q92539 896 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 MAP4K1Q92918 833 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 CDC5LQ99459 802 aaKnown RBP7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 SNX14Q9Y5W7 946 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 NDUFB9Q9Y6M9 179 aa7.84□□□□□ -1.16
NPIPA1-204ENST00000534720 CHD4Q14839 1912 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 GOLIM4O00461 696 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 GTF2E1P29083 439 aaPredicted RBP7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 NEK4P51957 841 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 FOXK1P85037 733 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 NECTIN1Q15223 517 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 MCMDC2Q4G0Z9 681 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 PPP1R15BQ5SWA1 713 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 TPTE2Q6XPS3 522 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 NBPF5PQ86XG9 351 aaPredicted RBP7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 HELLSQ9NRZ9 838 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 CHMP5Q9NZZ3 219 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 CCDC88AQ3V6T2 1871 aa7.83□□□□□ -1.16
NPIPA1-204ENST00000534720 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 UQCRFS1P1P0C7P4 283 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 SLC5A1P13866 664 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 SSFA2P28290 1259 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 ARID4AP29374 1257 aaPredicted RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 DDIT3P35638 169 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 ANKRD18AQ8IVF6 992 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 NLRP3Q96P20 1036 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 RBM8AQ9Y5S9 174 aaKnown RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 CARMIL3Q8ND23 1372 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 PLSCR1O15162 318 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 RNF113AO15541 343 aaKnown RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 TAF5LO75529 589 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 PHF14O94880 888 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 HSP90AA1P07900 732 aaKnown RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 ZFYP08048 801 aaPredicted RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 FKBP4Q02790 459 aaKnown RBP eCLIP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 DSG2Q14126 1118 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 TXNRD1Q16881 649 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 PRPF40BQ6NWY9 871 aaKnown RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 TMEM92Q6UXU6 159 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 C3orf67Q6ZVT6 689 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 ZNF589Q86UQ0 364 aaPredicted RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 TM6SF1Q9BZW5 370 aa7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 BSDC1Q9NW68 430 aaPredicted RBP7.82□□□□□ -1.16
NPIPA1-204ENST00000534720 QSER1Q2KHR3 1735 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 ZKSCAN1P17029 563 aaPredicted RBP7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 RXRBP28702 533 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 MCAMP43121 646 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 ZAP70P43403 619 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 KCNJ4P48050 445 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 CHRNDQ07001 517 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 CAMK2BQ13554 666 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 SCARF1Q14162 830 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 TTF1Q15361 905 aaPredicted RBP7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 NFKBIBQ15653 356 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 CREB3L3Q68CJ9 461 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 CCDC102BQ68D86 513 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 HELBQ8NG08 1087 aaPredicted RBP7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 HMG20BQ9P0W2 317 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 ANKRD31Q8N7Z5 1873 aa7.81□□□□□ -1.16
NPIPA1-204ENST00000534720 SLC27A2O14975 620 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 PHKA1P46020 1223 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 NFIXQ14938 502 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 SEC62Q99442 399 aaKnown RBP7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 CHGBP05060 677 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 GYS1P13807 737 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 UBE4AQ14139 1066 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 ZSCAN25Q6NSZ9 544 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 CCDC129Q6ZRS4 1044 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 TTC14Q96N46 770 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 DSCC1Q9BVC3 393 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 CWC22Q9HCG8 908 aaKnown RBP7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 ZSWIM6Q9HCJ5 1215 aa7.8□□□□□ -1.16
NPIPA1-204ENST00000534720 RPAP1Q9BWH6 1393 aaPredicted RBP7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 KIAA1551Q9HCM1 1747 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 CYP2E1P05181 493 aaPredicted RBP7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 CASTP20810 708 aaKnown RBP7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 PSMA5P28066 241 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 TM4SF1P30408 202 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 RPS8P62241 208 aaKnown RBP7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 CUL4AQ13619 759 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 CELF1Q92879 486 aaKnown RBP7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 TMX3Q96JJ7 454 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 UPF3BQ9BZI7 483 aaKnown RBP7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 MINPP1Q9UNW1 487 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 MAST3O60307 1309 aa7.79□□□□□ -1.16
NPIPA1-204ENST00000534720 MAST2Q6P0Q8 1798 aa7.78□□□□□ -1.16
NPIPA1-204ENST00000534720 EP400Q96L91 3159 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms