RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
CAPN1-224ENST00000533129 NSUN7Q8NE18 718 aaKnown RBP17.22■□□□□ 0.35
CAPN1-224ENST00000533129 BBXQ8WY36 941 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-224ENST00000533129 BPIFA3Q9BQP9 254 aa17.22■□□□□ 0.35
CAPN1-224ENST00000533129 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-224ENST00000533129 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
CAPN1-224ENST00000533129 USP28Q96RU2 1077 aa17.21■□□□□ 0.35
CAPN1-224ENST00000533129 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
CAPN1-224ENST00000533129 EXOC5O00471 708 aa17.21■□□□□ 0.35
CAPN1-224ENST00000533129 MYL6BP14649 208 aa17.21■□□□□ 0.35
CAPN1-224ENST00000533129 NUTM2BA6NNL0 878 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 NUTM2EB1AL46 878 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
CAPN1-224ENST00000533129 NUTM2AQ8IVF1 878 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 SLIT2O94813 1529 aa17.2■□□□□ 0.34
CAPN1-224ENST00000533129 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 AIMP1Q12904 312 aaKnown RBP17.2■□□□□ 0.34
CAPN1-224ENST00000533129 ERCC6LQ2NKX8 1250 aa17.2■□□□□ 0.34
CAPN1-224ENST00000533129 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
CAPN1-224ENST00000533129 FHOD1Q9Y613 1164 aa17.2■□□□□ 0.34
CAPN1-224ENST00000533129 NRDCO43847 1150 aa17.19■□□□□ 0.34
CAPN1-224ENST00000533129 ATP5JP18859 108 aa17.19■□□□□ 0.34
CAPN1-224ENST00000533129 RIC3Q7Z5B4 369 aa17.19■□□□□ 0.34
CAPN1-224ENST00000533129 FMR1NBQ8N0W7 255 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-224ENST00000533129 CYP21A2P08686 494 aa17.19■□□□□ 0.34
CAPN1-224ENST00000533129 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
CAPN1-224ENST00000533129 ST7Q9NRC1 585 aa17.19■□□□□ 0.34
CAPN1-224ENST00000533129 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.19■□□□□ 0.343e-6■□□□□ 10.3
CAPN1-224ENST00000533129 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 ZNF609O15014 1411 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 SFPQP23246 707 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAPN1-224ENST00000533129 CYP2C19P33261 490 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 ME1P48163 572 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 CLCN6P51797 869 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 ARMCX5Q6P1M9 558 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 SYT10Q6XYQ8 523 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 COPS6Q7L5N1 327 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 A0A087WWV3 80 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 CTDNEP1O95476 244 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 SIL1Q9H173 461 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
CAPN1-224ENST00000533129 A0A1W2PQ27 194 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 A0A1W2PQ64 194 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 A0A1W2PQD8 194 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 CCP110O43303 1012 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-224ENST00000533129 XPO4Q9C0E2 1151 aaKnown RBP17.17■□□□□ 0.34
CAPN1-224ENST00000533129 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 ERICH4A6NGS2 130 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 PNMA6AP0CW24 399 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-224ENST00000533129 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
CAPN1-224ENST00000533129 TMC6Q7Z403 805 aa17.17■□□□□ 0.34
CAPN1-224ENST00000533129 EDC3Q96F86 508 aaKnown RBP17.17■□□□□ 0.34
CAPN1-224ENST00000533129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-224ENST00000533129 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-224ENST00000533129 AGXT2Q9BYV1 514 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 ARGLU1Q9NWB6 273 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-224ENST00000533129 NPHP1O15259 732 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
CAPN1-224ENST00000533129 SMC2O95347 1197 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 TPM4P67936 248 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 ZRSR1Q15695 479 aaKnown RBP17.16■□□□□ 0.34
CAPN1-224ENST00000533129 ARHGAP29Q52LW3 1261 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-224ENST00000533129 PIGBQ92521 554 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 RTEL1Q9NZ71 1219 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 KIAA1468Q9P260 1216 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 PCDHA7Q9UN72 937 aa17.16■□□□□ 0.34
CAPN1-224ENST00000533129 ITGB4P16144 1822 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 ZRANB2O95218 330 aaKnown RBP eCLIP17.15■□□□□ 0.344e-7■■■■■ 32.1
CAPN1-224ENST00000533129 SLC20A2Q08357 652 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 LRRN4CLQ8ND94 238 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 CHMP4CQ96CF2 233 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 LRRC2Q9BYS8 371 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 BCL9O00512 1426 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 TULP2O00295 520 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 ETF1P62495 437 aaKnown RBP17.15■□□□□ 0.34
CAPN1-224ENST00000533129 DPCR1Q3MIW9 517 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 STOX1Q6ZVD7 989 aa17.15■□□□□ 0.34
CAPN1-224ENST00000533129 SRRTQ9BXP5 876 aaKnown RBP17.15■□□□□ 0.34
CAPN1-224ENST00000533129 FOSBP53539 338 aa17.14■□□□□ 0.33
CAPN1-224ENST00000533129 BARGINQ6ZT62 677 aa17.14■□□□□ 0.33
CAPN1-224ENST00000533129 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-224ENST00000533129 DBNLQ9UJU6 430 aaKnown RBP17.14■□□□□ 0.33
CAPN1-224ENST00000533129 PLA2G4AP47712 749 aa17.14■□□□□ 0.33
CAPN1-224ENST00000533129 DDB1Q16531 1140 aa17.14■□□□□ 0.33
CAPN1-224ENST00000533129 CCDC129Q6ZRS4 1044 aa17.14■□□□□ 0.33
CAPN1-224ENST00000533129 ERCC4Q92889 916 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-224ENST00000533129 SH3TC1Q8TE82 1336 aa17.14■□□□□ 0.33
CAPN1-224ENST00000533129 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms