RNA–Protein interactions for RNA: ENST00000532377.1

LMO7-221, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-221ENST00000532377 CDC27P30260 824 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 GRIA4P48058 902 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 GRIK4Q16099 956 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 PRPF40BQ6NWY9 871 aaKnown RBP4.72□□□□□ -1.65
LMO7-221ENST00000532377 PI16Q6UXB8 463 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 ZSCAN29Q8IWY8 852 aaPredicted RBP4.72□□□□□ -1.65
LMO7-221ENST00000532377 EPS8L3Q8TE67 593 aaKnown RBP4.72□□□□□ -1.65
LMO7-221ENST00000532377 MUC3BQ9H195 1237 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 WWC3Q9ULE0 1092 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 PPME1Q9Y570 386 aa4.72□□□□□ -1.65
LMO7-221ENST00000532377 CEP164Q9UPV0 1460 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 PNMA6FA0A0J9YX94 578 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 ANKRD33BA6NCL7 494 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 SPDYE3A6NKU9 549 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 C1QTNF9BB2RNN3 333 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 PTPRAP18433 802 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 TRIM28Q13263 835 aaKnown RBP4.71□□□□□ -1.66
LMO7-221ENST00000532377 GRM2Q14416 872 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 COL19A1Q14993 1142 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 HGSNATQ68CP4 663 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 SHISA2Q6UWI4 295 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 FBXO33Q7Z6M2 555 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 BSNDQ8WZ55 320 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 SRA1Q9HD15 236 aaKnown RBP4.71□□□□□ -1.66
LMO7-221ENST00000532377 ABCB6Q9NP58 842 aa4.71□□□□□ -1.66
LMO7-221ENST00000532377 CFTRP13569 1480 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 H3BRJ5 948 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 LINC01387J3KSC0 135 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 SOX1O00570 391 aaPredicted RBP4.7□□□□□ -1.66
LMO7-221ENST00000532377 ITPKAP23677 461 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 SPRED3Q2MJR0 410 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 FOXD4L6Q3SYB3 417 aaPredicted RBP4.7□□□□□ -1.66
LMO7-221ENST00000532377 PRRT3Q5FWE3 981 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 TXNDC11Q6PKC3 985 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 FOXD4L3Q6VB84 417 aaPredicted RBP4.7□□□□□ -1.66
LMO7-221ENST00000532377 LENG1Q96BZ8 264 aaPredicted RBP4.7□□□□□ -1.66
LMO7-221ENST00000532377 NRSN2Q9GZP1 204 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 LIN7BQ9HAP6 207 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 KCNK4Q9NYG8 393 aa4.7□□□□□ -1.66
LMO7-221ENST00000532377 FANCD2Q9BXW9 1451 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 CADPSQ9ULU8 1353 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 BIVM-ERCC5R4GMW8 1640 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 A0A096LPE4 126 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 A0A1W2PPZ6 126 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 FSCN2O14926 492 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 ADAM11O75078 769 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 ESRRAP11474 423 aaPredicted RBP4.69□□□□□ -1.66
LMO7-221ENST00000532377 RAC1P63000 192 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 ADGRE1Q14246 886 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 ZNF423Q2M1K9 1284 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.69□□□□□ -1.66
LMO7-221ENST00000532377 MAP4K3Q8IVH8 894 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 FBF1Q8TES7 1133 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 RNF19AQ9NV58 838 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 PDS5BQ9NTI5 1447 aa4.69□□□□□ -1.66
LMO7-221ENST00000532377 MAPK8P45983 427 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 PIP4K2BP78356 416 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 PTPN12Q05209 780 aaKnown RBP4.68□□□□□ -1.66
LMO7-221ENST00000532377 MBTPS1Q14703 1052 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 IGF2-ASQ6U949 168 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 C3orf58Q8NDZ4 430 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 WNT8BQ93098 351 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 KLHDC7BQ96G42 594 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 SPOCK3Q9BQ16 436 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 CARD10Q9BWT7 1032 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 OSBPL7Q9BZF2 842 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 EHD4Q9H223 541 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 ZNF576Q9H609 170 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 SOX17Q9H6I2 414 aaPredicted RBP4.68□□□□□ -1.66
LMO7-221ENST00000532377 OSGEPQ9NPF4 335 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 DNMBPQ6XZF7 1577 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 WDR97A6NE52 1622 aa4.68□□□□□ -1.66
LMO7-221ENST00000532377 WDR62O43379 1518 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 TMEM238LA0A1B0GVL6 79 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 UNCXA6NJT0 531 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 DDX3YO15523 660 aaKnown RBP4.67□□□□□ -1.66
LMO7-221ENST00000532377 WISP1O95388 367 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 CDC25BP30305 580 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 TAGLNQ01995 201 aaKnown RBP4.67□□□□□ -1.66
LMO7-221ENST00000532377 FAAP100Q0VG06 881 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 ALG1LQ6GMV1 187 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 Q6ZS46 218 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 TMEM130Q8N3G9 435 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 KLHL23Q8NBE8 558 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 ASAP3Q8TDY4 903 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 SSBP4Q9BWG4 385 aaPredicted RBP4.67□□□□□ -1.66
LMO7-221ENST00000532377 BCO2Q9BYV7 579 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 MRC2Q9UBG0 1479 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 PBRM1Q86U86 1689 aa4.67□□□□□ -1.66
LMO7-221ENST00000532377 ABCC8Q09428 1581 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 TOP2BQ02880 1626 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 RBM47A0AV96 593 aaKnown RBP4.66□□□□□ -1.66
LMO7-221ENST00000532377 C9orf172C9J069 976 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 B3GALT4O96024 378 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 LDHBP07195 334 aaKnown RBP4.66□□□□□ -1.66
LMO7-221ENST00000532377 ERCC3P19447 782 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 NOS3P29474 1203 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 CD68P34810 354 aaPredicted RBP4.66□□□□□ -1.66
LMO7-221ENST00000532377 PCDH1Q08174 1060 aa4.66□□□□□ -1.66
LMO7-221ENST00000532377 NXPE4Q6UWF7 544 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms