RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 ZFYP08048 801 aaPredicted RBP18.05■□□□□ 0.48
SRPRA-206ENST00000532259 ZSCAN22P10073 491 aaPredicted RBP18.05■□□□□ 0.48
SRPRA-206ENST00000532259 GPHNQ9NQX3 736 aaPredicted RBP18.05■□□□□ 0.48
SRPRA-206ENST00000532259 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
SRPRA-206ENST00000532259 XRCC6P12956 609 aaKnown RBP eCLIP18.05■□□□□ 0.48
SRPRA-206ENST00000532259 PDE6AP16499 860 aa18.05■□□□□ 0.48
SRPRA-206ENST00000532259 ANKRD1Q15327 319 aa18.05■□□□□ 0.48
SRPRA-206ENST00000532259 FERMT3Q86UX7 667 aa18.05■□□□□ 0.48
SRPRA-206ENST00000532259 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
SRPRA-206ENST00000532259 RTL9Q8NET4 1388 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 LAMA4Q16363 1823 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 JAK2O60674 1132 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 APPP05067 770 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 GYG1P46976 350 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 SF3B3Q15393 1217 aaKnown RBP18.04■□□□□ 0.48
SRPRA-206ENST00000532259 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.04■□□□□ 0.482e-6■■□□□ 11.7
SRPRA-206ENST00000532259 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 NPHP1O15259 732 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 GADD45BO75293 160 aaPredicted RBP18.04■□□□□ 0.48
SRPRA-206ENST00000532259 APOBRQ0VD83 1088 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
SRPRA-206ENST00000532259 DDX11Q96FC9 970 aa18.04■□□□□ 0.48
SRPRA-206ENST00000532259 CDC5LQ99459 802 aaKnown RBP18.04■□□□□ 0.48
SRPRA-206ENST00000532259 MYH7P12883 1935 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 UQCRFS1P1P0C7P4 283 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 KLRK1P26718 216 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 FOSBP53539 338 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 LARP1BQ659C4 914 aaKnown RBP18.03■□□□□ 0.48
SRPRA-206ENST00000532259 SCN7AQ01118 1682 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 LAMB2P55268 1798 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 TCRBV5S4A2TA0A5A2 114 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 RFC4P35249 363 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 DHX32Q7L7V1 743 aaKnown RBP18.03■□□□□ 0.48
SRPRA-206ENST00000532259 ALDH8A1Q9H2A2 487 aaPredicted RBP18.03■□□□□ 0.48
SRPRA-206ENST00000532259 MINPP1Q9UNW1 487 aa18.03■□□□□ 0.48
SRPRA-206ENST00000532259 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 TRIM37O94972 964 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 F13A1P00488 732 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 CCT2P78371 535 aaKnown RBP18.02■□□□□ 0.48
SRPRA-206ENST00000532259 FAM173BQ6P4H8 233 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 USP48Q86UV5 1035 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 MAGEB6Q8N7X4 407 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 MTMR6Q9Y217 621 aa18.02■□□□□ 0.48
SRPRA-206ENST00000532259 CASZ1Q86V15 1759 aa18.02■□□□□ 0.47
SRPRA-206ENST00000532259 FIBPO43427 364 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 EXOSC10Q01780 885 aaKnown RBP18.01■□□□□ 0.47
SRPRA-206ENST00000532259 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
SRPRA-206ENST00000532259 L1TD1Q5T7N2 865 aaKnown RBP18.01■□□□□ 0.47
SRPRA-206ENST00000532259 SLC10A5Q5PT55 438 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 CDC37L1Q7L3B6 337 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
SRPRA-206ENST00000532259 NBPF3Q9H094 633 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
SRPRA-206ENST00000532259 LY75O60449 1722 aa18.01■□□□□ 0.47
SRPRA-206ENST00000532259 TICAM2Q86XR7 235 aa18■□□□□ 0.47
SRPRA-206ENST00000532259 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
SRPRA-206ENST00000532259 INCENPQ9NQS7 918 aa18■□□□□ 0.47
SRPRA-206ENST00000532259 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
SRPRA-206ENST00000532259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18■□□□□ 0.47
SRPRA-206ENST00000532259 DNM1Q05193 864 aaKnown RBP18■□□□□ 0.47
SRPRA-206ENST00000532259 SCRN1Q12765 414 aa18■□□□□ 0.47
SRPRA-206ENST00000532259 IMMTQ16891 758 aaKnown RBP18■□□□□ 0.47
SRPRA-206ENST00000532259 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
SRPRA-206ENST00000532259 NLRP3Q96P20 1036 aa18■□□□□ 0.47
SRPRA-206ENST00000532259 ARAP2Q8WZ64 1704 aa18■□□□□ 0.47
SRPRA-206ENST00000532259 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 NFIXQ14938 502 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 GRPEL1Q9HAV7 217 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 TMEM63CQ9P1W3 806 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 TPTE2Q6XPS3 522 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 STK11IPQ8N1F8 1099 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 ARMT1Q9H993 441 aa17.99■□□□□ 0.47
SRPRA-206ENST00000532259 PRKAB2O43741 272 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 ZSCAN25Q6NSZ9 544 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 MIGA1Q8NAN2 632 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 ABCF2Q9UG63 623 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 MBD4O95243 580 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 TM4SF1P30408 202 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
SRPRA-206ENST00000532259 STRBPQ96SI9 672 aaKnown RBP17.98■□□□□ 0.47
SRPRA-206ENST00000532259 NYXQ9GZU5 481 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
SRPRA-206ENST00000532259 ZNF213O14771 459 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
SRPRA-206ENST00000532259 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 TBC1D10CQ8IV04 446 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 CTNNA3Q9UI47 895 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 TAOK2Q9UL54 1235 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 COL1A1P02452 1464 aaPredicted RBP17.97■□□□□ 0.47
SRPRA-206ENST00000532259 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
SRPRA-206ENST00000532259 MAP3K12Q12852 859 aa17.96■□□□□ 0.47
SRPRA-206ENST00000532259 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms