RNA–Protein interactions for RNA: ENST00000531429.1

SCUBE2-211, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-211ENST00000531429 TAGLNQ01995 201 aaKnown RBP9.52□□□□□ -0.89
SCUBE2-211ENST00000531429 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
SCUBE2-211ENST00000531429 IFNL2Q8IZJ0 200 aa9.52□□□□□ -0.89
SCUBE2-211ENST00000531429 FLAD1Q8NFF5 587 aa9.52□□□□□ -0.89
SCUBE2-211ENST00000531429 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
SCUBE2-211ENST00000531429 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 PHKG2P15735 406 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 SIK1P57059 783 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 PANK3Q9H999 370 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 ASAP1Q9ULH1 1129 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 ITGB4P16144 1822 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 COL24A1Q17RW2 1714 aa9.51□□□□□ -0.89
SCUBE2-211ENST00000531429 CHD4Q14839 1912 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 MAP2P11137 1827 aaKnown RBP9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 SENP3-EIF4A1A0A087X0R7 540 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 TMEM229AB2RXF0 380 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 IGFBP4P22692 258 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 VAMP1P23763 118 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 HMGB2P26583 209 aaKnown RBP9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 HELQQ8TDG4 1101 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 COL26A1Q96A83 441 aa9.5□□□□□ -0.89
SCUBE2-211ENST00000531429 TAF1LQ8IZX4 1826 aa9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 POTEMA6NI47 508 aa9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 ERVH48-1M5A8F1 160 aa9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 ITPK1Q13572 414 aa9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 NAA30Q147X3 362 aaPredicted RBP9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 MORC1Q86VD1 984 aa9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 ZSCAN29Q8IWY8 852 aaPredicted RBP9.49□□□□□ -0.89
SCUBE2-211ENST00000531429 SCNN1DP51172 638 aa9.48□□□□□ -0.89
SCUBE2-211ENST00000531429 C1QTNF8P60827 252 aa9.48□□□□□ -0.89
SCUBE2-211ENST00000531429 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
SCUBE2-211ENST00000531429 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
SCUBE2-211ENST00000531429 STAU1O95793 577 aaKnown RBP9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 RECKO95980 971 aa9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 RGL4Q8IZJ4 473 aa9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 MAP4K5Q9Y4K4 846 aa9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 CD2APQ9Y5K6 639 aa9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
SCUBE2-211ENST00000531429 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 CABP4P57796 275 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 COL19A1Q14993 1142 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 TNS4Q8IZW8 715 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 ZNF526Q8TF50 670 aaPredicted RBP9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.9
SCUBE2-211ENST00000531429 MMP10P09238 476 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 NPR3P17342 541 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 GDF10P55107 478 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 CNGB1Q14028 1251 aaPredicted RBP9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 CC2D2BQ6DHV5 1058 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 VASH1Q7L8A9 365 aaPredicted RBP9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 DCAF5Q96JK2 942 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 RTCBQ9Y3I0 505 aaKnown RBP9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 KDRP35968 1356 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 KDM6AO15550 1401 aaPredicted RBP9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 ATP10DQ9P241 1426 aa9.45□□□□□ -0.9
SCUBE2-211ENST00000531429 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 MTHFSP49914 203 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 EPHA4P54764 986 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 PTPN5P54829 565 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 TRIM32Q13049 653 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 EAPPQ56P03 285 aaPredicted RBP9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 SLC4A9Q96Q91 983 aa9.44□□□□□ -0.9
SCUBE2-211ENST00000531429 PLEKHG2Q9H7P9 1386 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 FAM13AO94988 1023 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 P4HBP07237 508 aaKnown RBP9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 MPSTP25325 297 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 SKOR1P84550 965 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 TRAPPC3LQ5T215 181 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 RBCK1Q9BYM8 510 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 TSPAN10Q9H1Z9 355 aaPredicted RBP9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 CYLDQ9NQC7 956 aa9.43□□□□□ -0.9
SCUBE2-211ENST00000531429 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 BACH1O14867 736 aa9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 RFC4P35249 363 aa9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 TMC7Q7Z402 723 aa9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 ETNK1Q9HBU6 452 aa9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 TMPRSS4Q9NRS4 437 aa9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 SERTAD1Q9UHV2 236 aa9.42□□□□□ -0.9
SCUBE2-211ENST00000531429 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
SCUBE2-211ENST00000531429 CNTNAP4Q9C0A0 1308 aa9.41□□□□□ -0.9
SCUBE2-211ENST00000531429 HMOX1P09601 288 aa9.41□□□□□ -0.9
SCUBE2-211ENST00000531429 IL13P35225 146 aa9.41□□□□□ -0.9
SCUBE2-211ENST00000531429 CRKLP46109 303 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms