RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
TTC39A-216ENST00000530004 COA1Q9GZY4 146 aa17.42■□□□□ 0.38
TTC39A-216ENST00000530004 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
TTC39A-216ENST00000530004 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
TTC39A-216ENST00000530004 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
TTC39A-216ENST00000530004 EDC3Q96F86 508 aaKnown RBP17.41■□□□□ 0.38
TTC39A-216ENST00000530004 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
TTC39A-216ENST00000530004 NDUFB9Q9Y6M9 179 aa17.41■□□□□ 0.38
TTC39A-216ENST00000530004 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
TTC39A-216ENST00000530004 TTC39AQ5SRH9 613 aa17.4■□□□□ 0.38
TTC39A-216ENST00000530004 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
TTC39A-216ENST00000530004 ZNF512BQ96KM6 892 aaPredicted RBP17.4■□□□□ 0.38
TTC39A-216ENST00000530004 IL25Q9H293 177 aa17.4■□□□□ 0.38
TTC39A-216ENST00000530004 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
TTC39A-216ENST00000530004 G3V3G9 751 aa17.4■□□□□ 0.38
TTC39A-216ENST00000530004 ARID4AP29374 1257 aaPredicted RBP17.4■□□□□ 0.38
TTC39A-216ENST00000530004 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
TTC39A-216ENST00000530004 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
TTC39A-216ENST00000530004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.4■□□□□ 0.38
TTC39A-216ENST00000530004 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
TTC39A-216ENST00000530004 UTRNP46939 3433 aa17.4■□□□□ 0.38
TTC39A-216ENST00000530004 HIP1O00291 1037 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 SGSM2O43147 1006 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 IL1R1P14778 569 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 LMNB1P20700 586 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
TTC39A-216ENST00000530004 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
TTC39A-216ENST00000530004 ZBTB22O15209 634 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 ECE2O60344 883 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 PAG1Q9NWQ8 432 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 COL4A5P29400 1685 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 GOLIM4O00461 696 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 MCAMP43121 646 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 SCARF1Q14162 830 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 NIM1KQ8IY84 436 aa17.38■□□□□ 0.37
TTC39A-216ENST00000530004 SEMA3EO15041 775 aa17.37■□□□□ 0.37
TTC39A-216ENST00000530004 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
TTC39A-216ENST00000530004 KIF2CQ99661 725 aa17.37■□□□□ 0.37
TTC39A-216ENST00000530004 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 YDJCA8MPS7 323 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 NMIQ13287 307 aaPredicted RBP17.36■□□□□ 0.37
TTC39A-216ENST00000530004 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 DENND2AQ9ULE3 1009 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 ZNRF3Q9ULT6 936 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 RFX7Q2KHR2 1363 aa17.36■□□□□ 0.37
TTC39A-216ENST00000530004 PI16Q6UXB8 463 aa17.35■□□□□ 0.37
TTC39A-216ENST00000530004 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
TTC39A-216ENST00000530004 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-216ENST00000530004 KCNQ5Q9NR82 932 aa17.35■□□□□ 0.37
TTC39A-216ENST00000530004 SNRKQ9NRH2 765 aa17.35■□□□□ 0.37
TTC39A-216ENST00000530004 RNF181Q9P0P0 153 aa17.35■□□□□ 0.37
TTC39A-216ENST00000530004 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-216ENST00000530004 PDS5AQ29RF7 1337 aaKnown RBP17.34■□□□□ 0.37
TTC39A-216ENST00000530004 A0A0D9SFI3 127 aa17.34■□□□□ 0.37
TTC39A-216ENST00000530004 GTF2IP78347 998 aa17.34■□□□□ 0.37
TTC39A-216ENST00000530004 BECN1Q14457 450 aa17.34■□□□□ 0.37
TTC39A-216ENST00000530004 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
TTC39A-216ENST00000530004 RAD50Q92878 1312 aa17.34■□□□□ 0.37
TTC39A-216ENST00000530004 FZD9O00144 591 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.37
TTC39A-216ENST00000530004 ZAP70P43403 619 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 SLC4A3P48751 1232 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 CHAF1AQ13111 956 aaPredicted RBP17.33■□□□□ 0.37
TTC39A-216ENST00000530004 TTLL5Q6EMB2 1281 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 KIAA1211Q6ZU35 1233 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 LSG1Q9H089 658 aaKnown RBP17.33■□□□□ 0.37
TTC39A-216ENST00000530004 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 JAG2Q9Y219 1238 aa17.33■□□□□ 0.37
TTC39A-216ENST00000530004 FAM205AQ6ZU69 1335 aa17.33■□□□□ 0.36
TTC39A-216ENST00000530004 MCCP23508 829 aa17.33■□□□□ 0.36
TTC39A-216ENST00000530004 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
TTC39A-216ENST00000530004 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
TTC39A-216ENST00000530004 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
TTC39A-216ENST00000530004 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
TTC39A-216ENST00000530004 RAD17O75943 681 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 CHGBP05060 677 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
TTC39A-216ENST00000530004 CXCL9Q07325 125 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 TICAM2Q86XR7 235 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 WDR66Q8TBY9 1149 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 SBF1O95248 1867 aa17.31■□□□□ 0.36
TTC39A-216ENST00000530004 EIF6P56537 245 aaKnown RBP17.3■□□□□ 0.36
TTC39A-216ENST00000530004 DACT2Q5SW24 774 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 CHD4Q14839 1912 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 PSMD14O00487 310 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 MFSD14BQ5SR56 506 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 TBC1D22AQ8WUA7 517 aa17.3■□□□□ 0.36
TTC39A-216ENST00000530004 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms