RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 PLEKHG6Q3KR16 790 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 SLFNL1Q499Z3 407 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 NOM1Q5C9Z4 860 aaKnown RBP3.41□□□□□ -1.86
FDFT1-216ENST00000529521 DNTTIP2Q5QJE6 756 aaKnown RBP3.41□□□□□ -1.86
FDFT1-216ENST00000529521 ZSCAN30Q86W11 494 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 NT5DC4Q86YG4 428 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 ACRBPQ8NEB7 543 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 CEP63Q96MT8 703 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 CDC5LQ99459 802 aaKnown RBP3.41□□□□□ -1.86
FDFT1-216ENST00000529521 CCDC94Q9BW85 323 aaPredicted RBP3.41□□□□□ -1.86
FDFT1-216ENST00000529521 PPP1R12CQ9BZL4 782 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 SPC25Q9HBM1 224 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 ZDHHC3Q9NYG2 299 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 TFIP11Q9UBB9 837 aaKnown RBP3.41□□□□□ -1.86
FDFT1-216ENST00000529521 SFMBT1Q9UHJ3 866 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 GJA3Q9Y6H8 435 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 EEA1Q15075 1411 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 ERCC6Q03468 1493 aa3.41□□□□□ -1.86
FDFT1-216ENST00000529521 PALM3A6NDB9 673 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 NACADO15069 1562 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 LILRB5O75023 590 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 KIF20AO95235 890 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 SKIP12755 728 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 TATP17735 454 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 LMOD1P29536 600 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 TNNT2P45379 298 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 TERF1P54274 439 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 TBX4P57082 545 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 DMTNQ08495 405 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 SFSWAPQ12872 951 aaKnown RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 PSMD2Q13200 908 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 TCEAL1Q15170 157 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 ZC3H12AQ5D1E8 599 aaKnown RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 ILDR2Q71H61 639 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 PIK3R5Q8WYR1 880 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 IL17RAQ96F46 866 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 ZNF512BQ96KM6 892 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 BCL2L13Q9BXK5 485 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 BRINP2Q9C0B6 783 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 MUC3BQ9H195 1237 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 SUDS3Q9H7L9 328 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 CWC25Q9NXE8 425 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 USP21Q9UK80 565 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 G3BP2Q9UN86 482 aaKnown RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 IQSEC3Q9UPP2 1182 aaPredicted RBP3.4□□□□□ -1.87
FDFT1-216ENST00000529521 TBX22Q9Y458 520 aa3.4□□□□□ -1.87
FDFT1-216ENST00000529521 WRNQ14191 1432 aaPredicted RBP eCLIP3.39□□□□□ -1.87
FDFT1-216ENST00000529521 PES1O00541 588 aaKnown RBP3.39□□□□□ -1.87
FDFT1-216ENST00000529521 ATP9BO43861 1147 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 HMMRO75330 724 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 ATG7O95352 703 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 MED26O95402 600 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 FGAP02671 866 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 INHAP05111 366 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 TGFB3P10600 412 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 NEFHP12036 1026 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 CD53P19397 219 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 PAX7P23759 505 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 VAMP1P23763 118 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 SMTNP53814 917 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 GDF10P55107 478 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 RAC1P63000 192 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 JAG1P78504 1218 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 IFT88Q13099 833 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 CCDC144BQ3MJ40 725 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 EFCAB2Q5VUJ9 269 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 CCDC174Q6PII3 467 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 RAB44Q7Z6P3 723 aaPredicted RBP3.39□□□□□ -1.87
FDFT1-216ENST00000529521 FMNL3Q8IVF7 1028 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 NLGN1Q8N2Q7 840 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 WFDC12Q8WWY7 111 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 SEZ6LQ9BYH1 1024 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 C22orf23Q9BZE7 217 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 LRRC27Q9C0I9 530 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 CXorf56Q9H5V9 222 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 RETREG1Q9H6L5 497 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 VRTNQ9H8Y1 702 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 TCEAL9Q9UHQ7 104 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 ISY1Q9ULR0 285 aaKnown RBP3.39□□□□□ -1.87
FDFT1-216ENST00000529521 AKAP2Q9Y2D5 859 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 CEP83Q9Y592 693 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 USP3Q9Y6I4 520 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 WASHC2AQ641Q2 1341 aa3.39□□□□□ -1.87
FDFT1-216ENST00000529521 GOLGA6L3A6NEY3 463 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 IPO5O00410 1097 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 MPHOSPH10O00566 681 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 CTAGE5O15320 804 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 TIMM44O43615 452 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 LDHCP07864 332 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 NAT2P11245 290 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 NOS3P29474 1203 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 CASQ1P31415 396 aa3.38□□□□□ -1.87
FDFT1-216ENST00000529521 IREB2P48200 963 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 EIF5P55010 431 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 GP2P55259 537 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 CCT2P78371 535 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 HMGN5P82970 282 aaKnown RBP3.38□□□□□ -1.87
FDFT1-216ENST00000529521 USP4Q13107 963 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms