RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ANKRD20A12PQ8NF67 263 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 DRC1Q96MC2 740 aa20.58■□□□□ 0.89
LTBP3-210ENST00000528516 JAG2Q9Y219 1238 aa20.58■□□□□ 0.89
LTBP3-210ENST00000528516 A0A1B0GVL5 298 aa20.58■□□□□ 0.88
LTBP3-210ENST00000528516 MCM6Q14566 821 aa20.58■□□□□ 0.88
LTBP3-210ENST00000528516 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-210ENST00000528516 CWC25Q9NXE8 425 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-210ENST00000528516 JMYQ8N9B5 988 aa20.58■□□□□ 0.88
LTBP3-210ENST00000528516 EFCC1Q9HA90 598 aa20.58■□□□□ 0.88
LTBP3-210ENST00000528516 ELP1O95163 1332 aa20.57■□□□□ 0.88
LTBP3-210ENST00000528516 SLC3A2P08195 630 aaKnown RBP20.57■□□□□ 0.88
LTBP3-210ENST00000528516 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
LTBP3-210ENST00000528516 H2AFXP16104 143 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-210ENST00000528516 CCDC150Q8NCX0 1101 aa20.57■□□□□ 0.88
LTBP3-210ENST00000528516 ZNF496Q96IT1 587 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-210ENST00000528516 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
LTBP3-210ENST00000528516 DEF6Q9H4E7 631 aa20.57■□□□□ 0.88
LTBP3-210ENST00000528516 CTAGE5O15320 804 aa20.57■□□□□ 0.88
LTBP3-210ENST00000528516 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-210ENST00000528516 TTC21AQ8NDW8 1320 aa20.56■□□□□ 0.88
LTBP3-210ENST00000528516 ZKSCAN3Q9BRR0 538 aa20.56■□□□□ 0.88
LTBP3-210ENST00000528516 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
LTBP3-210ENST00000528516 VPS18Q9P253 973 aa20.56■□□□□ 0.88
LTBP3-210ENST00000528516 RRP15Q9Y3B9 282 aaKnown RBP20.56■□□□□ 0.88
LTBP3-210ENST00000528516 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
LTBP3-210ENST00000528516 CCP110O43303 1012 aa20.56■□□□□ 0.88
LTBP3-210ENST00000528516 SLC26A6Q9BXS9 759 aa20.56■□□□□ 0.88
LTBP3-210ENST00000528516 TLR7Q9NYK1 1049 aaKnown RBP20.56■□□□□ 0.88
LTBP3-210ENST00000528516 MCMDC2Q4G0Z9 681 aa20.55■□□□□ 0.88
LTBP3-210ENST00000528516 XBP1P17861 261 aa20.55■□□□□ 0.88
LTBP3-210ENST00000528516 TTC31Q49AM3 519 aaPredicted RBP20.55■□□□□ 0.88
LTBP3-210ENST00000528516 ZHX3Q9H4I2 956 aa20.55■□□□□ 0.88
LTBP3-210ENST00000528516 PNPLA6Q8IY17 1366 aa20.55■□□□□ 0.88
LTBP3-210ENST00000528516 GNG11P61952 73 aa20.55■□□□□ 0.88
LTBP3-210ENST00000528516 XPO4Q9C0E2 1151 aaKnown RBP20.55■□□□□ 0.88
LTBP3-210ENST00000528516 LCMT1Q9UIC8 334 aa20.55■□□□□ 0.88
LTBP3-210ENST00000528516 A0A0D9SFI3 127 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 PIP4K2BP78356 416 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 SLC9C2Q5TAH2 1124 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
LTBP3-210ENST00000528516 ATP7BP35670 1465 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
LTBP3-210ENST00000528516 ETF1P62495 437 aaKnown RBP20.54■□□□□ 0.88
LTBP3-210ENST00000528516 SLC27A2O14975 620 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 STARD3NLO95772 234 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 HSP90B2PQ58FF3 399 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 ACSBG1Q96GR2 724 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 ZSWIM6Q9HCJ5 1215 aa20.54■□□□□ 0.88
LTBP3-210ENST00000528516 SSBP05455 408 aaKnown RBP eCLIP20.53■□□□□ 0.88
LTBP3-210ENST00000528516 IQCB1Q15051 598 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 UTP14AQ9BVJ6 771 aaKnown RBP20.53■□□□□ 0.88
LTBP3-210ENST00000528516 GOLGA8AA7E2F4 631 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 ANKRD65E5RJM6 399 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 E4F1Q66K89 784 aaPredicted RBP20.53■□□□□ 0.88
LTBP3-210ENST00000528516 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 CCDC102AQ96A19 550 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
LTBP3-210ENST00000528516 PTPDC1A2A3K4 754 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 DNA2P51530 1060 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 ZNF790Q6PG37 636 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 IP6K1Q92551 441 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
LTBP3-210ENST00000528516 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.88
LTBP3-210ENST00000528516 SPECC1Q5M775 1068 aa20.52■□□□□ 0.88
LTBP3-210ENST00000528516 CTR9Q6PD62 1173 aa20.52■□□□□ 0.88
LTBP3-210ENST00000528516 PHACTR2O75167 634 aa20.52■□□□□ 0.88
LTBP3-210ENST00000528516 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
LTBP3-210ENST00000528516 EPB41L2O43491 1005 aaKnown RBP20.52■□□□□ 0.87
LTBP3-210ENST00000528516 ALDH1L1O75891 902 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 SARM1Q6SZW1 724 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 PPFIBP1Q86W92 1011 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 AMOTL1Q8IY63 956 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 MIGA1Q8NAN2 632 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 MYL10Q9BUA6 226 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 SLC12A7Q9Y666 1083 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 CPS1P31327 1500 aa20.52■□□□□ 0.87
LTBP3-210ENST00000528516 LOC102724159A0A0B4J2E5 919 aa20.51■□□□□ 0.87
LTBP3-210ENST00000528516 A0A1B0GUL7 405 aa20.51■□□□□ 0.87
LTBP3-210ENST00000528516 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
LTBP3-210ENST00000528516 PWP2Q15269 919 aaKnown RBP20.51■□□□□ 0.87
LTBP3-210ENST00000528516 DDX21Q9NR30 783 aaKnown RBP eCLIP20.51■□□□□ 0.87
LTBP3-210ENST00000528516 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
LTBP3-210ENST00000528516 TMX4Q9H1E5 349 aaPredicted RBP20.51■□□□□ 0.87
LTBP3-210ENST00000528516 SALL3Q9BXA9 1300 aa20.51■□□□□ 0.87
LTBP3-210ENST00000528516 CPSF1Q10570 1443 aaKnown RBP20.51■□□□□ 0.87
LTBP3-210ENST00000528516 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
LTBP3-210ENST00000528516 DHX37Q8IY37 1157 aaKnown RBP20.5■□□□□ 0.87
LTBP3-210ENST00000528516 GOLGA5Q8TBA6 731 aa20.5■□□□□ 0.87
LTBP3-210ENST00000528516 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
LTBP3-210ENST00000528516 DLC1Q96QB1 1528 aa20.5■□□□□ 0.87
LTBP3-210ENST00000528516 AFMP43652 599 aa20.5■□□□□ 0.87
LTBP3-210ENST00000528516 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
LTBP3-210ENST00000528516 FER1L4A9Z1Z3 1794 aa20.5■□□□□ 0.87
LTBP3-210ENST00000528516 ICE2Q659A1 982 aa20.5■□□□□ 0.87
LTBP3-210ENST00000528516 PTPN21Q16825 1174 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 PI4K2BQ8TCG2 481 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 AOX1Q06278 1338 aa20.49■□□□□ 0.87
LTBP3-210ENST00000528516 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms