RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ZCRB1Q8TBF4 217 aaKnown RBP13.64□□□□□ -0.23
LINC01001-201ENST00000526704 RIC1Q4ADV7 1423 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 WDR17Q8IZU2 1322 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 HAND2P61296 217 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 FKBP4Q02790 459 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01001-201ENST00000526704 ANKRD7Q92527 254 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 PCDHA7Q9UN72 937 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
LINC01001-201ENST00000526704 SCARF1Q14162 830 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 TTC39AQ5SRH9 613 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
LINC01001-201ENST00000526704 FMR1NBQ8N0W7 255 aaPredicted RBP13.63□□□□□ -0.23
LINC01001-201ENST00000526704 ANO10Q9NW15 660 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 CEP126Q9P2H0 1117 aa13.63□□□□□ -0.23
LINC01001-201ENST00000526704 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 MRPS27Q92552 414 aaKnown RBP13.62□□□□□ -0.23
LINC01001-201ENST00000526704 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
LINC01001-201ENST00000526704 XAGE2Q96GT9 111 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 NEDD4P46934 1319 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 LRRC8AQ8IWT6 810 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 CHMP4CQ96CF2 233 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 ITGB4P16144 1822 aa13.62□□□□□ -0.23
LINC01001-201ENST00000526704 SMTNL1A8MU46 457 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 ANTXR2P58335 489 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
LINC01001-201ENST00000526704 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
LINC01001-201ENST00000526704 WASHC4Q2M389 1173 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 CCDC158Q5M9N0 1113 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 A0A1W2PQ27 194 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 A0A1W2PQ64 194 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 A0A1W2PQD8 194 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 PRC1O43663 620 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 FGAP02671 866 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 ZFYP08048 801 aaPredicted RBP13.61□□□□□ -0.23
LINC01001-201ENST00000526704 TNNT1P13805 278 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 ADALQ6DHV7 355 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 CEP57L1Q8IYX8 460 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 LINC00301Q8NCQ3 95 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 CLIC4Q9Y696 253 aa13.61□□□□□ -0.23
LINC01001-201ENST00000526704 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 KLF18A0A0U1RQI7 1052 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 BECN2A8MW95 431 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 RBM6P78332 1123 aaKnown RBP13.6□□□□□ -0.23
LINC01001-201ENST00000526704 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
LINC01001-201ENST00000526704 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
LINC01001-201ENST00000526704 PUS7LQ9H0K6 701 aaKnown RBP13.6□□□□□ -0.23
LINC01001-201ENST00000526704 ARAP2Q8WZ64 1704 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 ZAP70P43403 619 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 NDUFA8P51970 172 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 GORABQ5T7V8 394 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 APPBP2Q92624 585 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 C8orf76Q96K31 380 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 FBXO3Q9UK99 471 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 AKAP2Q9Y2D5 859 aa13.6□□□□□ -0.23
LINC01001-201ENST00000526704 USP27XA6NNY8 438 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 NEMFO60524 1076 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 NCBP1Q09161 790 aaKnown RBP13.59□□□□□ -0.23
LINC01001-201ENST00000526704 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 TPD52L1Q16890 204 aaPredicted RBP13.59□□□□□ -0.23
LINC01001-201ENST00000526704 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
LINC01001-201ENST00000526704 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 CCZ1BP86790 482 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
LINC01001-201ENST00000526704 STK38Q15208 465 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 ATP2B3Q16720 1220 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
LINC01001-201ENST00000526704 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
LINC01001-201ENST00000526704 NUP98P52948 1817 aa13.58□□□□□ -0.23
LINC01001-201ENST00000526704 ATRNO75882 1429 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 YEATS4O95619 227 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
LINC01001-201ENST00000526704 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 NCOA7Q8NI08 942 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 KCNG4Q8TDN1 519 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 PLA2G12BQ9BX93 195 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 PRDM11Q9NQV5 511 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 DOCK2Q92608 1830 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 GPAA1O43292 621 aa13.58□□□□□ -0.24
LINC01001-201ENST00000526704 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms