RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PAPPA2Q9BXP8 1791 aa7.3□□□□□ -1.24
PABPC1-223ENST00000523636 PIEZO1Q92508 2521 aa7.3□□□□□ -1.24
PABPC1-223ENST00000523636 MYH14Q7Z406 1995 aaKnown RBP7.29□□□□□ -1.24
PABPC1-223ENST00000523636 AFDNP55196 1824 aaKnown RBP7.29□□□□□ -1.24
PABPC1-223ENST00000523636 GYS1P13807 737 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 PDE4CQ08493 712 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 USP4Q13107 963 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 ARID5BQ14865 1188 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 CIAPIN1Q6FI81 312 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 TRIM50Q86XT4 487 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 CNTROBQ8N137 903 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 SNIP1Q8TAD8 396 aaKnown RBP7.29□□□□□ -1.24
PABPC1-223ENST00000523636 ZNF428Q96B54 188 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 CDK19Q9BWU1 502 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 NLRP2Q9NX02 1062 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 NOD1Q9Y239 953 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 TLL2Q9Y6L7 1015 aa7.29□□□□□ -1.24
PABPC1-223ENST00000523636 RBBP6Q7Z6E9 1792 aaKnown RBP7.28□□□□□ -1.24
PABPC1-223ENST00000523636 FAM196BA6NMK8 535 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 GDF9O60383 454 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 FSHRP23945 695 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 ECE1P42892 770 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 RBM25P49756 843 aaKnown RBP7.28□□□□□ -1.24
PABPC1-223ENST00000523636 PRR20EP86478 221 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 PRR20CP86479 221 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 PRR20DP86480 221 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 PRR20BP86481 221 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 PRR20AP86496 221 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 DDR1Q08345 913 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 ITPK1Q13572 414 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 ELOAQ14241 798 aaKnown RBP7.28□□□□□ -1.24
PABPC1-223ENST00000523636 TSGA10IPQ3SY00 556 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 PCDHB11Q9Y5F2 797 aa7.28□□□□□ -1.24
PABPC1-223ENST00000523636 ERVH48-1M5A8F1 160 aa7.27□□□□□ -1.25
PABPC1-223ENST00000523636 ATP1A2P50993 1020 aa7.27□□□□□ -1.25
PABPC1-223ENST00000523636 TMF1P82094 1093 aa7.27□□□□□ -1.25
PABPC1-223ENST00000523636 NBPF1Q3BBV0 1214 aa7.27□□□□□ -1.25
PABPC1-223ENST00000523636 CCDC116Q8IYX3 515 aa7.27□□□□□ -1.25
PABPC1-223ENST00000523636 DEPDC4Q8N2C3 294 aa7.27□□□□□ -1.25
PABPC1-223ENST00000523636 CACNA1SQ13698 1873 aa7.26□□□□□ -1.25
PABPC1-223ENST00000523636 ERVK-9P63128 1117 aa7.26□□□□□ -1.25
PABPC1-223ENST00000523636 FOXC1Q12948 553 aa7.26□□□□□ -1.25
PABPC1-223ENST00000523636 EAPPQ56P03 285 aaPredicted RBP7.26□□□□□ -1.25
PABPC1-223ENST00000523636 USTQ9Y2C2 406 aa7.26□□□□□ -1.25
PABPC1-223ENST00000523636 AKAP11Q9UKA4 1901 aa7.26□□□□□ -1.25
PABPC1-223ENST00000523636 COL5A3P25940 1745 aaPredicted RBP7.26□□□□□ -1.25
PABPC1-223ENST00000523636 NRXN2Q9P2S2 1712 aa7.26□□□□□ -1.25
PABPC1-223ENST00000523636 INSRP06213 1382 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 TRAF5O00463 557 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 ALDH1A1P00352 501 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 MYCP01106 439 aaPredicted RBP7.25□□□□□ -1.25
PABPC1-223ENST00000523636 OXLD1Q5BKU9 147 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 FOXD4L5Q5VV16 416 aaPredicted RBP7.25□□□□□ -1.25
PABPC1-223ENST00000523636 CTU1Q7Z7A3 348 aaKnown RBP7.25□□□□□ -1.25
PABPC1-223ENST00000523636 CYP4X1Q8N118 509 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 NLGN1Q8N2Q7 840 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 ANKRD24Q8TF21 1146 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 FOXD4L4Q8WXT5 416 aaPredicted RBP7.25□□□□□ -1.25
PABPC1-223ENST00000523636 TOR4AQ9NXH8 423 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 EMILIN1Q9Y6C2 1016 aa7.25□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L10C9JJH3 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L21D6R901 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 RASA1P20936 1047 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 PLA2G5P39877 138 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 RAB15P59190 212 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 PTK7Q13308 1070 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
PABPC1-223ENST00000523636 CC2D2BQ6DHV5 1058 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 SAPCD2Q86UD0 394 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 LARGE2Q8N3Y3 721 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 RETREG2Q8NC44 543 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 PARP3Q9Y6F1 533 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 WASF2Q9Y6W5 498 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 ERBB4Q15303 1308 aa7.24□□□□□ -1.25
PABPC1-223ENST00000523636 COL11A2P13942 1736 aaPredicted RBP7.24□□□□□ -1.25
PABPC1-223ENST00000523636 TTC24A2A3L6 582 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-223ENST00000523636 IQCA1LA6NCM1 817 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 SOX1O00570 391 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-223ENST00000523636 NR3C2P08235 984 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 GTF2IP78347 998 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 NNTQ13423 1086 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 CDCA8Q53HL2 280 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 TRIM67Q6ZTA4 783 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 OGFOD1Q8N543 542 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 SNX27Q96L92 541 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 TRAIPQ9BWF2 469 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 DNAAF2Q9NVR5 837 aaKnown RBP7.23□□□□□ -1.25
PABPC1-223ENST00000523636 ANKRD31Q8N7Z5 1873 aa7.23□□□□□ -1.25
PABPC1-223ENST00000523636 ZNF541Q9H0D2 1346 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms