RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ST5P78524 1137 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 RBM43Q6ZSC3 357 aaKnown RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 RRP15Q9Y3B9 282 aaKnown RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 VWDEQ8N2E2 1590 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 A0A087WZG4 1122 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 ATP5J2-PTCD1G3V325 749 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PTCD1O75127 700 aaKnown RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 H2AFXP16104 143 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 LONRF2Q1L5Z9 754 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PARD6BQ9BYG5 372 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 FHOD1Q9Y613 1164 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PRR36Q9H6K5 1346 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 ARAP3Q8WWN8 1544 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PRC1O43663 620 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 YEATS4O95619 227 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PLA2G4AP47712 749 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 MYSM1Q5VVJ2 828 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 CC2D1AQ6P1N0 951 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 FEZ2Q9UHY8 353 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-212ENST00000523387 LMTK2Q8IWU2 1503 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 CTAGE9A4FU28 777 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 MAP9Q49MG5 647 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
CSMD1-212ENST00000523387 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 LRRN4CLQ8ND94 238 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 CCDC148Q8NFR7 591 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 RABGGTAQ92696 567 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 FANCLQ9NW38 375 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 SASH1O94885 1247 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 PNOCQ13519 176 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 TNNI3KQ59H18 835 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 RAPGEF4Q8WZA2 1011 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 ZNF446Q9NWS9 450 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 ADAM21Q9UKJ8 722 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 FPGT-TNNI3KV9GXZ4 949 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 A0A1W2PQ27 194 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 A0A1W2PQ64 194 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 ZNF213O14771 459 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 TADA3O75528 432 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 HOXB7P09629 217 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 DRC1Q96MC2 740 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 L2HGDHQ9H9P8 463 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 PAG1Q9NWQ8 432 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 RTEL1Q9NZ71 1219 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 NFE2L3Q9Y4A8 694 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 INO80Q9ULG1 1556 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-212ENST00000523387 DEPDC5O75140 1603 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 ADCY9O60503 1353 aa10.34□□□□□ -0.75
CSMD1-212ENST00000523387 ACTN2P35609 894 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 BRD3Q15059 726 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 YEATS2Q9ULM3 1422 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 KIAA0754O94854 1291 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 TXLNAP40222 546 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 METAP2P50579 478 aaKnown RBP eCLIP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 LINC00301Q8NCQ3 95 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 EXOC4Q96A65 974 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 IL17RAQ96F46 866 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 NUP88Q99567 741 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 AKR1B15C9JRZ8 316 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 TRIM66O15016 1216 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 RXRAP19793 462 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 USP8P40818 1118 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 STX17P56962 302 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 FAM69CQ0P6D2 419 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 TRMT44Q8IYL2 757 aaKnown RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 NCOA7Q8NI08 942 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 ERICH2A1L162 156 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 E7EWF7 191 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 ATP5JP18859 108 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 IARSP41252 1262 aaKnown RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 MNAT1P51948 309 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 SPECC1Q5M775 1068 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 DHX58Q96C10 678 aa10.33□□□□□ -0.76
CSMD1-212ENST00000523387 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-212ENST00000523387 NEXMIFQ5QGS0 1516 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 METP08581 1390 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 RDXP35241 583 aaKnown RBP10.32□□□□□ -0.76
CSMD1-212ENST00000523387 SPECC1LQ69YQ0 1117 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 ANKRD24Q8TF21 1146 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 NLRP2Q9NX02 1062 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 PDIA3P30101 505 aaKnown RBP10.32□□□□□ -0.76
CSMD1-212ENST00000523387 SLC39A6Q13433 755 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 PROSER3Q2NL68 480 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-212ENST00000523387 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms