RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
SDCBP-210ENST00000522843 MSX1P28360 303 aa9.74□□□□□ -0.85
SDCBP-210ENST00000522843 KCNQ4P56696 695 aa9.74□□□□□ -0.85
SDCBP-210ENST00000522843 GRIN2CQ14957 1233 aa9.74□□□□□ -0.85
SDCBP-210ENST00000522843 C4orf17Q53FE4 359 aa9.74□□□□□ -0.85
SDCBP-210ENST00000522843 Q8N3U1 123 aa9.74□□□□□ -0.85
SDCBP-210ENST00000522843 BRD4O60885 1362 aaPredicted RBP9.74□□□□□ -0.85
SDCBP-210ENST00000522843 COL13A1Q5TAT6 717 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-210ENST00000522843 DCAF11Q8TEB1 546 aa9.73□□□□□ -0.85
SDCBP-210ENST00000522843 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
SDCBP-210ENST00000522843 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
SDCBP-210ENST00000522843 FGFR3P22607 806 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 SLCO4C1Q6ZQN7 724 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 ABHD17AQ96GS6 310 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 CEP126Q9P2H0 1117 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 CCDC7Q96M83 1385 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 PCNTO95613 3336 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 NFAT5O94916 1531 aa9.72□□□□□ -0.85
SDCBP-210ENST00000522843 GNB5O14775 395 aa9.71□□□□□ -0.86
SDCBP-210ENST00000522843 BNIP3LO60238 219 aa9.71□□□□□ -0.86
SDCBP-210ENST00000522843 CTBSQ01459 385 aa9.71□□□□□ -0.86
SDCBP-210ENST00000522843 BTBD6Q96KE9 485 aa9.71□□□□□ -0.86
SDCBP-210ENST00000522843 NDFIP2Q9NV92 336 aa9.71□□□□□ -0.86
SDCBP-210ENST00000522843 COL23A1Q86Y22 540 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-210ENST00000522843 CCDC85AQ96PX6 553 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-210ENST00000522843 TFCP2L1Q9NZI6 479 aa9.7□□□□□ -0.86
SDCBP-210ENST00000522843 CABP1Q9NZU7 370 aa9.7□□□□□ -0.86
SDCBP-210ENST00000522843 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
SDCBP-210ENST00000522843 C1QTNF9BB2RNN3 333 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 LY75O60449 1722 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 GPR37L1O60883 481 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 EPXP11678 715 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 BANK1Q8NDB2 785 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 CRISPLD1Q9H336 500 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
SDCBP-210ENST00000522843 NSD2O96028 1365 aa9.68□□□□□ -0.86
SDCBP-210ENST00000522843 SRPK2P78362 688 aaKnown RBP9.68□□□□□ -0.86
SDCBP-210ENST00000522843 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 TTC21BQ7Z4L5 1316 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 ARAFP10398 606 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 PRELPP51888 382 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 HTRA3P83110 453 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 NBPF1Q3BBV0 1214 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 CD163Q86VB7 1156 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 KRTAP4-8Q9BYQ9 185 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 NOP53Q9NZM5 478 aaKnown RBP9.67□□□□□ -0.86
SDCBP-210ENST00000522843 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
SDCBP-210ENST00000522843 IL2RBP14784 551 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 USP4Q13107 963 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 FIGNL1Q6PIW4 674 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 MTMR14Q8NCE2 650 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
SDCBP-210ENST00000522843 WDR90Q96KV7 1748 aa9.65□□□□□ -0.86
SDCBP-210ENST00000522843 DGKGP49619 791 aa9.65□□□□□ -0.86
SDCBP-210ENST00000522843 JMYQ8N9B5 988 aa9.65□□□□□ -0.86
SDCBP-210ENST00000522843 NLRP2Q9NX02 1062 aa9.65□□□□□ -0.86
SDCBP-210ENST00000522843 PCDHGC4Q9Y5F7 938 aa9.65□□□□□ -0.86
SDCBP-210ENST00000522843 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-210ENST00000522843 NEURL1BA8MQ27 555 aa9.64□□□□□ -0.87
SDCBP-210ENST00000522843 ZCCHC2Q9C0B9 1178 aaKnown RBP9.64□□□□□ -0.87
SDCBP-210ENST00000522843 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
SDCBP-210ENST00000522843 DOT1LQ8TEK3 1739 aa9.64□□□□□ -0.87
SDCBP-210ENST00000522843 KIAA1210Q9ULL0 1709 aa9.64□□□□□ -0.87
SDCBP-210ENST00000522843 IGSF1Q8N6C5 1336 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 CENPJQ9HC77 1338 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-210ENST00000522843 APBB1O00213 710 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 TOMM70O94826 608 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 CHRNA4P43681 627 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 TLR1Q15399 786 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 TBC1D9Q6ZT07 1266 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
SDCBP-210ENST00000522843 NLRP8Q86W28 1048 aa9.62□□□□□ -0.87
SDCBP-210ENST00000522843 C1orf216Q8TAB5 229 aa9.62□□□□□ -0.87
SDCBP-210ENST00000522843 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
SDCBP-210ENST00000522843 NMRK2Q9NPI5 230 aa9.62□□□□□ -0.87
SDCBP-210ENST00000522843 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
SDCBP-210ENST00000522843 CCNL1Q9UK58 526 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-210ENST00000522843 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
SDCBP-210ENST00000522843 USP54Q70EL1 1684 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 LTN1O94822 1766 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 STAU1O95793 577 aaKnown RBP9.61□□□□□ -0.87
SDCBP-210ENST00000522843 PLA2G4AP47712 749 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 CHSY3Q70JA7 882 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 SMIM5Q71RC9 77 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 ANKRD24Q8TF21 1146 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 DOLKQ9UPQ8 538 aa9.61□□□□□ -0.87
SDCBP-210ENST00000522843 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
SDCBP-210ENST00000522843 ADH6P28332 368 aa9.6□□□□□ -0.87
SDCBP-210ENST00000522843 SYTL4Q96C24 671 aaPredicted RBP9.6□□□□□ -0.87
SDCBP-210ENST00000522843 C5P01031 1676 aa9.6□□□□□ -0.87
SDCBP-210ENST00000522843 USP31Q70CQ4 1352 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms