RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
MRPS28-208ENST00000521605 USP17L3A6NCW0 530 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 USP17L4A6NCW7 530 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 USP17L1Q7RTZ2 530 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 PANK1Q8TE04 598 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 PSME4Q14997 1843 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 PTPRCP08575 1304 aa13.61□□□□□ -0.23
MRPS28-208ENST00000521605 WNT10BO00744 389 aa13.6□□□□□ -0.23
MRPS28-208ENST00000521605 RLBP1P12271 317 aa13.6□□□□□ -0.23
MRPS28-208ENST00000521605 CRHR2Q13324 411 aa13.6□□□□□ -0.23
MRPS28-208ENST00000521605 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
MRPS28-208ENST00000521605 RBM27Q9P2N5 1060 aaKnown RBP13.6□□□□□ -0.23
MRPS28-208ENST00000521605 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
MRPS28-208ENST00000521605 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
MRPS28-208ENST00000521605 IRS4O14654 1257 aaPredicted RBP13.59□□□□□ -0.23
MRPS28-208ENST00000521605 DSG3P32926 999 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 INHBEP58166 350 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 CAP1Q01518 475 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 SLC9C1Q4G0N8 1177 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 LDLRAD1Q5T700 205 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 OGFOD1Q8N543 542 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 CLMNQ96JQ2 1002 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
MRPS28-208ENST00000521605 COG6Q9Y2V7 657 aa13.59□□□□□ -0.23
MRPS28-208ENST00000521605 SP3Q02447 781 aa13.58□□□□□ -0.24
MRPS28-208ENST00000521605 WNK4Q96J92 1243 aa13.58□□□□□ -0.24
MRPS28-208ENST00000521605 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
MRPS28-208ENST00000521605 CEP290O15078 2479 aa13.57□□□□□ -0.24
MRPS28-208ENST00000521605 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-208ENST00000521605 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-208ENST00000521605 PODNQ7Z5L7 613 aa13.57□□□□□ -0.24
MRPS28-208ENST00000521605 ISCA1Q9BUE6 129 aa13.57□□□□□ -0.24
MRPS28-208ENST00000521605 PTCH2Q9Y6C5 1203 aa13.57□□□□□ -0.24
MRPS28-208ENST00000521605 RANBP2P49792 3224 aaKnown RBP13.56□□□□□ -0.24
MRPS28-208ENST00000521605 ZBTB48P10074 688 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-208ENST00000521605 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
MRPS28-208ENST00000521605 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 DPF3Q92784 378 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 CHPF2Q9P2E5 772 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 XDHP47989 1333 aa13.56□□□□□ -0.24
MRPS28-208ENST00000521605 A0A0C4DFX4 3053 aa13.55□□□□□ -0.24
MRPS28-208ENST00000521605 COL6A3P12111 3177 aa13.55□□□□□ -0.24
MRPS28-208ENST00000521605 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
MRPS28-208ENST00000521605 OTUD7BQ6GQQ9 843 aa13.55□□□□□ -0.24
MRPS28-208ENST00000521605 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
MRPS28-208ENST00000521605 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-208ENST00000521605 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
MRPS28-208ENST00000521605 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
MRPS28-208ENST00000521605 KIAA0825Q8IV33 1275 aa13.54□□□□□ -0.24
MRPS28-208ENST00000521605 SH3TC2Q8TF17 1288 aa13.54□□□□□ -0.24
MRPS28-208ENST00000521605 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
MRPS28-208ENST00000521605 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
MRPS28-208ENST00000521605 CCDC152Q4G0S7 254 aa13.53□□□□□ -0.24
MRPS28-208ENST00000521605 TMEM57Q8N5G2 664 aa13.53□□□□□ -0.24
MRPS28-208ENST00000521605 PTPN18Q99952 460 aa13.53□□□□□ -0.24
MRPS28-208ENST00000521605 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
MRPS28-208ENST00000521605 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
MRPS28-208ENST00000521605 SSC5DA1L4H1 1573 aa13.53□□□□□ -0.24
MRPS28-208ENST00000521605 ZBTB7BO15156 539 aaPredicted RBP13.52□□□□□ -0.25
MRPS28-208ENST00000521605 PPP1R12BO60237 982 aaPredicted RBP13.52□□□□□ -0.25
MRPS28-208ENST00000521605 GJA5P36382 358 aa13.52□□□□□ -0.25
MRPS28-208ENST00000521605 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.25
MRPS28-208ENST00000521605 ITPRIPQ8IWB1 547 aa13.52□□□□□ -0.25
MRPS28-208ENST00000521605 ZNF646O15015 1829 aaPredicted RBP13.52□□□□□ -0.25
MRPS28-208ENST00000521605 MED23Q9ULK4 1368 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
MRPS28-208ENST00000521605 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
MRPS28-208ENST00000521605 ARHGEF6Q15052 776 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 STRIP1Q5VSL9 837 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 PCDHB15Q9Y5E8 787 aa13.51□□□□□ -0.25
MRPS28-208ENST00000521605 LAMB1P07942 1786 aa13.5□□□□□ -0.25
MRPS28-208ENST00000521605 MAP3K11Q16584 847 aa13.5□□□□□ -0.25
MRPS28-208ENST00000521605 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
MRPS28-208ENST00000521605 ELP3Q9H9T3 547 aa13.5□□□□□ -0.25
MRPS28-208ENST00000521605 COL1A1P02452 1464 aaPredicted RBP13.49□□□□□ -0.25
MRPS28-208ENST00000521605 ZSWIM8A7E2V4 1837 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
MRPS28-208ENST00000521605 CCT4P50991 539 aaKnown RBP13.49□□□□□ -0.25
MRPS28-208ENST00000521605 DLGAP5Q15398 846 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 TAF1CQ15572 869 aaPredicted RBP13.49□□□□□ -0.25
MRPS28-208ENST00000521605 NBPF12Q5TAG4 269 aaPredicted RBP13.49□□□□□ -0.25
MRPS28-208ENST00000521605 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 TXNRD3Q86VQ6 643 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
MRPS28-208ENST00000521605 LRCH3Q96II8 777 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms