RNA–Protein interactions for RNA: ENST00000518905.1

CLMAT3-202, colorectal liver metastasis associated transcript 3, humanhuman

TSL 3

Gene CLMAT3, Length 410 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-202ENST00000518905 TSPAN10Q9H1Z9 355 aaPredicted RBP4.24□□□□□ -1.73
CLMAT3-202ENST00000518905 CXorf56Q9H5V9 222 aa4.24□□□□□ -1.73
CLMAT3-202ENST00000518905 HOMER2Q9NSB8 354 aa4.24□□□□□ -1.73
CLMAT3-202ENST00000518905 SERTAD1Q9UHV2 236 aa4.24□□□□□ -1.73
CLMAT3-202ENST00000518905 ACAD8Q9UKU7 415 aa4.24□□□□□ -1.73
CLMAT3-202ENST00000518905 EMILIN1Q9Y6C2 1016 aa4.24□□□□□ -1.73
CLMAT3-202ENST00000518905 KLHL33A6NCF5 533 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 TNFRSF10BO14763 440 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 IPO7O95373 1038 aaKnown RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 SSBP05455 408 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 TGFB3P10600 412 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 EPB42P16452 691 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 ZAP70P43403 619 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 DNM1Q05193 864 aaKnown RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 SIM2Q14190 667 aaPredicted RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 TLR1Q15399 786 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 TEAD4Q15561 434 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 LONRF1Q17RB8 773 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 INO80DQ53TQ3 878 aaPredicted RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 CCDC93Q567U6 631 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 COX20Q5RI15 118 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 HDGFL2Q7Z4V5 671 aaPredicted RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 LCA5Q86VQ0 697 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 EHBP1Q8NDI1 1231 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 MNS1Q8NEH6 495 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 MYRIPQ8NFW9 859 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 IFT43Q96FT9 208 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 RNPC3Q96LT9 517 aaKnown RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 CFAP53Q96M91 514 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 ALDH8A1Q9H2A2 487 aaPredicted RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 NEUROD4Q9HD90 331 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 GGT7Q9UJ14 662 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 DDX41Q9UJV9 622 aaKnown RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 FBXO2Q9UK22 296 aaPredicted RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 DIS3Q9Y2L1 958 aaKnown RBP4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 RABGAP1Q9Y3P9 1069 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 CUX2O14529 1486 aa4.23□□□□□ -1.73
CLMAT3-202ENST00000518905 KIF16BQ96L93 1317 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CC2D2AQ9P2K1 1620 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 PES1O00541 588 aaKnown RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 HRO43593 1189 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 TSPAN6O43657 245 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 PDGFAP04085 211 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 RPN1P04843 607 aaKnown RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 MYL3P08590 195 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 RBP3P10745 1247 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 RRM1P23921 792 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CASQ1P31415 396 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 PDE6BP35913 854 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 RPIAP49247 311 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 SCNN1DP51172 638 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 EPHA4P54764 986 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 SH3BP2P78314 561 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 FOXK2Q01167 660 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 EXOSC10Q01780 885 aaKnown RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 ARID5BQ14865 1188 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 GRAMD1BQ3KR37 738 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 C8orf34Q49A92 452 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 ARSHQ5FYA8 562 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 GNASQ5JWF2 1037 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 C10orf62Q5T681 223 aaPredicted RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 PTCRAQ6ISU1 281 aaPredicted RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 KLHL10Q6JEL2 608 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 LRP10Q7Z4F1 713 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 UBE2Q1Q7Z7E8 422 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CCDC116Q8IYX3 515 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 IFNL3Q8IZI9 196 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 NDUFAF2Q8N183 169 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 STK11IPQ8N1F8 1099 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 ACRBPQ8NEB7 543 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 XAGE2Q96GT9 111 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CDK15Q96Q40 435 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 NCAPGQ9BPX3 1015 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 NIFKQ9BYG3 293 aaKnown RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 C12orf49Q9H741 205 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 C11orf16Q9NQ32 467 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 PRDM9Q9NQV7 894 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 SMC4Q9NTJ3 1288 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CCDC87Q9NVE4 849 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 WBP1LQ9NX94 342 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 DONSONQ9NYP3 566 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 CLIC5Q9NZA1 410 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 SIRPGQ9P1W8 387 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 INTUQ9ULD6 942 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 POLIQ9UNA4 740 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 TRAK1Q9UPV9 953 aa4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 FCF1Q9Y324 198 aaKnown RBP4.22□□□□□ -1.73
CLMAT3-202ENST00000518905 IPO5O00410 1097 aaKnown RBP4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 EIF1AYO14602 144 aaKnown RBP4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 GPR182O15218 404 aa4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 SLC26A4O43511 780 aa4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 VAMP4O75379 141 aa4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 CDC45O75419 566 aa4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 WASHC5Q12768 1159 aa4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 NFX1Q12986 1120 aaKnown RBP4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 DCTN1Q14203 1278 aa4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 NFE2Q16621 373 aaPredicted RBP4.21□□□□□ -1.74
CLMAT3-202ENST00000518905 ALFQ53S48 1182 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms