RNA–Protein interactions for RNA: ENST00000518905.1

CLMAT3-202, colorectal liver metastasis associated transcript 3, humanhuman

TSL 3

Gene CLMAT3, Length 410 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-202ENST00000518905 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
CLMAT3-202ENST00000518905 AEBP2Q6ZN18 517 aaPredicted RBP9.14□□□□□ -0.95
CLMAT3-202ENST00000518905 PHF23Q9BUL5 403 aaPredicted RBP8.31□□□□□ -1.08
CLMAT3-202ENST00000518905 PLPPR3Q6T4P5 718 aa8.12□□□□□ -1.11
CLMAT3-202ENST00000518905 SENP3Q9H4L4 574 aaPredicted RBP8□□□□□ -1.13
CLMAT3-202ENST00000518905 EHMT2Q96KQ7 1210 aa7.48□□□□□ -1.21
CLMAT3-202ENST00000518905 KCNA4P22459 653 aa7.37□□□□□ -1.23
CLMAT3-202ENST00000518905 SLC24A1O60721 1099 aa7.29□□□□□ -1.24
CLMAT3-202ENST00000518905 NCBP3Q53F19 620 aaKnown RBP7.28□□□□□ -1.24
CLMAT3-202ENST00000518905 ADRA2BP18089 450 aa7.27□□□□□ -1.25
CLMAT3-202ENST00000518905 SLC4A1APQ9BWU0 796 aaKnown RBP7.25□□□□□ -1.25
CLMAT3-202ENST00000518905 FOXD1Q16676 465 aa7.15□□□□□ -1.26
CLMAT3-202ENST00000518905 PPP6R1Q9UPN7 881 aa7.15□□□□□ -1.26
CLMAT3-202ENST00000518905 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
CLMAT3-202ENST00000518905 PPP4R3CPQ6ZMV5 832 aa7.11□□□□□ -1.27
CLMAT3-202ENST00000518905 SCAF1Q9H7N4 1312 aaKnown RBP6.99□□□□□ -1.29
CLMAT3-202ENST00000518905 PIAS4Q8N2W9 510 aaPredicted RBP6.98□□□□□ -1.29
CLMAT3-202ENST00000518905 AMER1Q5JTC6 1135 aaPredicted RBP6.92□□□□□ -1.3
CLMAT3-202ENST00000518905 NPM3O75607 178 aaKnown RBP6.9□□□□□ -1.3
CLMAT3-202ENST00000518905 CNKSR2Q8WXI2 1034 aa6.9□□□□□ -1.3
CLMAT3-202ENST00000518905 FOXD4L1Q9NU39 408 aa6.81□□□□□ -1.32
CLMAT3-202ENST00000518905 DNAJC5BQ9UF47 199 aa6.79□□□□□ -1.32
CLMAT3-202ENST00000518905 ZBTB22O15209 634 aa6.67□□□□□ -1.34
CLMAT3-202ENST00000518905 MSH5O43196 834 aa6.67□□□□□ -1.34
CLMAT3-202ENST00000518905 RTN4Q9NQC3 1192 aaKnown RBP6.66□□□□□ -1.34
CLMAT3-202ENST00000518905 RNF216Q9NWF9 866 aaPredicted RBP6.64□□□□□ -1.35
CLMAT3-202ENST00000518905 ATXN8OSP0DMR3 200 aa6.63□□□□□ -1.35
CLMAT3-202ENST00000518905 DAXXQ9UER7 740 aaPredicted RBP6.63□□□□□ -1.35
CLMAT3-202ENST00000518905 MYCNP04198 464 aaPredicted RBP6.52□□□□□ -1.37
CLMAT3-202ENST00000518905 MYT1Q01538 1121 aa6.52□□□□□ -1.37
CLMAT3-202ENST00000518905 FKBP8Q14318 412 aa6.51□□□□□ -1.37
CLMAT3-202ENST00000518905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.43□□□□□ -1.38
CLMAT3-202ENST00000518905 HOXD11P31277 338 aaPredicted RBP6.43□□□□□ -1.38
CLMAT3-202ENST00000518905 HNRNPUL2Q1KMD3 747 aaKnown RBP6.43□□□□□ -1.38
CLMAT3-202ENST00000518905 TTBK1Q5TCY1 1321 aaPredicted RBP6.43□□□□□ -1.38
CLMAT3-202ENST00000518905 PELP1Q8IZL8 1130 aaKnown RBP6.41□□□□□ -1.38
CLMAT3-202ENST00000518905 FBXO3Q9UK99 471 aa6.39□□□□□ -1.39
CLMAT3-202ENST00000518905 DMRT2Q9Y5R5 561 aa6.38□□□□□ -1.39
CLMAT3-202ENST00000518905 MAPK8IP2Q13387 824 aaPredicted RBP6.36□□□□□ -1.39
CLMAT3-202ENST00000518905 SAMD1Q6SPF0 538 aaPredicted RBP6.34□□□□□ -1.39
CLMAT3-202ENST00000518905 SLC4A2P04920 1241 aa6.33□□□□□ -1.4
CLMAT3-202ENST00000518905 APLP2Q06481 763 aa6.33□□□□□ -1.4
CLMAT3-202ENST00000518905 ARXQ96QS3 562 aa6.31□□□□□ -1.4
CLMAT3-202ENST00000518905 BCANQ96GW7 911 aa6.27□□□□□ -1.41
CLMAT3-202ENST00000518905 PLCB2Q00722 1185 aa6.26□□□□□ -1.41
CLMAT3-202ENST00000518905 ERICH6Q7L0X2 663 aa6.22□□□□□ -1.41
CLMAT3-202ENST00000518905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.21□□□□□ -1.42
CLMAT3-202ENST00000518905 PRKCSHP14314 528 aaPredicted RBP6.18□□□□□ -1.42
CLMAT3-202ENST00000518905 HAP1P54257 671 aaPredicted RBP6.18□□□□□ -1.42
CLMAT3-202ENST00000518905 VSIG10Q8N0Z9 540 aa6.18□□□□□ -1.42
CLMAT3-202ENST00000518905 DCAF8L2P0C7V8 631 aa6.16□□□□□ -1.42
CLMAT3-202ENST00000518905 RANGAP1P46060 587 aaPredicted RBP6.16□□□□□ -1.42
CLMAT3-202ENST00000518905 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.15□□□□□ -1.42
CLMAT3-202ENST00000518905 FBLN2P98095 1184 aa6.12□□□□□ -1.43
CLMAT3-202ENST00000518905 SPDYE4A6NLX3 237 aa6.11□□□□□ -1.43
CLMAT3-202ENST00000518905 DCAF8L1A6NGE4 600 aa6.1□□□□□ -1.43
CLMAT3-202ENST00000518905 TAOK2Q9UL54 1235 aa6.1□□□□□ -1.43
CLMAT3-202ENST00000518905 TIMELESSQ9UNS1 1208 aa6.1□□□□□ -1.43
CLMAT3-202ENST00000518905 VASPP50552 380 aaPredicted RBP6.09□□□□□ -1.43
CLMAT3-202ENST00000518905 HOMEZQ8IX15 550 aa6.09□□□□□ -1.43
CLMAT3-202ENST00000518905 ZNF219Q9P2Y4 722 aaPredicted RBP6.09□□□□□ -1.43
CLMAT3-202ENST00000518905 TULP1O00294 542 aaPredicted RBP6.04□□□□□ -1.44
CLMAT3-202ENST00000518905 BBXQ8WY36 941 aaPredicted RBP6.04□□□□□ -1.44
CLMAT3-202ENST00000518905 ATF5Q9Y2D1 282 aaPredicted RBP6.02□□□□□ -1.45
CLMAT3-202ENST00000518905 PROM2Q8N271 834 aa6.01□□□□□ -1.45
CLMAT3-202ENST00000518905 ZBTB12Q9Y330 459 aaPredicted RBP6.01□□□□□ -1.45
CLMAT3-202ENST00000518905 U3KPZ7 1027 aaPredicted RBP6□□□□□ -1.45
CLMAT3-202ENST00000518905 TPRNQ4KMQ1 711 aa5.97□□□□□ -1.45
CLMAT3-202ENST00000518905 KLHL34Q8N239 644 aa5.97□□□□□ -1.45
CLMAT3-202ENST00000518905 SPOCK2Q92563 424 aa5.97□□□□□ -1.45
CLMAT3-202ENST00000518905 STAG3Q9UJ98 1225 aa5.97□□□□□ -1.45
CLMAT3-202ENST00000518905 PLEKHG5O94827 1062 aa5.96□□□□□ -1.46
CLMAT3-202ENST00000518905 IFNLR1Q8IU57 520 aaPredicted RBP5.94□□□□□ -1.46
CLMAT3-202ENST00000518905 SPRYD3Q8NCJ5 442 aa5.94□□□□□ -1.46
CLMAT3-202ENST00000518905 ECM2O94769 699 aaPredicted RBP5.93□□□□□ -1.46
CLMAT3-202ENST00000518905 NBR1Q14596 966 aa5.93□□□□□ -1.46
CLMAT3-202ENST00000518905 ZBTB47Q9UFB7 747 aaPredicted RBP5.93□□□□□ -1.46
CLMAT3-202ENST00000518905 PAXIP1Q6ZW49 1069 aaPredicted RBP5.92□□□□□ -1.46
CLMAT3-202ENST00000518905 PKD2Q13563 968 aa5.91□□□□□ -1.46
CLMAT3-202ENST00000518905 TRIM41Q8WV44 630 aa5.91□□□□□ -1.46
CLMAT3-202ENST00000518905 CFAP44Q96MT7 982 aa5.91□□□□□ -1.46
CLMAT3-202ENST00000518905 GTF3C3Q9Y5Q9 886 aa5.91□□□□□ -1.46
CLMAT3-202ENST00000518905 PODXL2Q9NZ53 605 aa5.89□□□□□ -1.47
CLMAT3-202ENST00000518905 PLCD3Q8N3E9 789 aa5.87□□□□□ -1.47
CLMAT3-202ENST00000518905 EIF5BO60841 1220 aaKnown RBP5.84□□□□□ -1.47
CLMAT3-202ENST00000518905 MKRN4PQ13434 485 aaPredicted RBP5.83□□□□□ -1.48
CLMAT3-202ENST00000518905 POLA2Q14181 598 aa5.82□□□□□ -1.48
CLMAT3-202ENST00000518905 TRHP20396 242 aaPredicted RBP5.81□□□□□ -1.48
CLMAT3-202ENST00000518905 RYDENQ9NUL5 291 aaKnown RBP5.81□□□□□ -1.48
CLMAT3-202ENST00000518905 KDM2AQ9Y2K7 1162 aa5.8□□□□□ -1.48
CLMAT3-202ENST00000518905 MIER1Q8N108 512 aa5.79□□□□□ -1.48
CLMAT3-202ENST00000518905 NPM2Q86SE8 214 aaKnown RBP5.78□□□□□ -1.48
CLMAT3-202ENST00000518905 CAPN15O75808 1086 aa5.77□□□□□ -1.49
CLMAT3-202ENST00000518905 CHGAP10645 457 aaKnown RBP5.77□□□□□ -1.49
CLMAT3-202ENST00000518905 TMEM132AQ24JP5 1023 aa5.77□□□□□ -1.49
CLMAT3-202ENST00000518905 ZNF692Q9BU19 519 aaPredicted RBP5.77□□□□□ -1.49
CLMAT3-202ENST00000518905 SPDYE2BA6NHP3 402 aa5.76□□□□□ -1.49
CLMAT3-202ENST00000518905 SPDYE6P0CI01 402 aa5.76□□□□□ -1.49
CLMAT3-202ENST00000518905 SPDYE2Q495Y8 402 aa5.76□□□□□ -1.49
CLMAT3-202ENST00000518905 CIZ1Q9ULV3 898 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms