RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
NPM1-205ENST00000518587 PDGFDQ9GZP0 370 aaPredicted RBP8.53□□□□□ -1.04
NPM1-205ENST00000518587 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
NPM1-205ENST00000518587 TTLL8A6PVC2 850 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 MEN1O00255 615 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 RFX1P22670 979 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 AMOTQ4VCS5 1084 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 TRIM50Q86XT4 487 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 XAGE2Q96GT9 111 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 ETNK1Q9HBU6 452 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
NPM1-205ENST00000518587 RGPD2P0DJD1 1756 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 ZNF831Q5JPB2 1677 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 SOBPA7XYQ1 873 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
NPM1-205ENST00000518587 MPRIPQ6WCQ1 1025 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 ESYT1Q9BSJ8 1104 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 VRTNQ9H8Y1 702 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 DNMT3LQ9UJW3 386 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 KIAA1024Q9UPX6 916 aa8.51□□□□□ -1.05
NPM1-205ENST00000518587 TAF1LQ8IZX4 1826 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 TUBGCP6Q96RT7 1819 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 ERVV-2B6SEH9 535 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 INHAP05111 366 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 C4BP0C0L5 1744 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
NPM1-205ENST00000518587 RASA1P20936 1047 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 RNF144AP50876 292 aaPredicted RBP8.5□□□□□ -1.05
NPM1-205ENST00000518587 ATP1A2P50993 1020 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 GDF10P55107 478 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 NLRP3Q96P20 1036 aa8.5□□□□□ -1.05
NPM1-205ENST00000518587 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
NPM1-205ENST00000518587 MAP2P11137 1827 aaKnown RBP8.5□□□□□ -1.05
NPM1-205ENST00000518587 LOC102724428A0A0B4J2F2 783 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 PPM1GO15355 546 aaPredicted RBP8.49□□□□□ -1.05
NPM1-205ENST00000518587 CYP27B1O15528 508 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 GPC1P35052 558 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 SIK1P57059 783 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 CENPCQ03188 943 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 PLEKHO1Q53GL0 409 aaPredicted RBP8.49□□□□□ -1.05
NPM1-205ENST00000518587 COL23A1Q86Y22 540 aaPredicted RBP8.49□□□□□ -1.05
NPM1-205ENST00000518587 USHBP1Q8N6Y0 703 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 RNF217Q8TC41 542 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 ITGB4P16144 1822 aa8.49□□□□□ -1.05
NPM1-205ENST00000518587 MAN1A2O60476 641 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 DKK1O94907 266 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 PHKG2P15735 406 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 C1QTNF8P60827 252 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 CRTC2Q53ET0 693 aaPredicted RBP8.48□□□□□ -1.05
NPM1-205ENST00000518587 CCDC102BQ68D86 513 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 LARGE2Q8N3Y3 721 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 GRIP2Q9C0E4 1043 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 POLKQ9UBT6 870 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 IGSF1Q8N6C5 1336 aa8.48□□□□□ -1.05
NPM1-205ENST00000518587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.47□□□□□ -1.05
NPM1-205ENST00000518587 PTK7Q13308 1070 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 NLGN1Q8N2Q7 840 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
NPM1-205ENST00000518587 TPCN2Q8NHX9 752 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 PIGBQ92521 554 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
NPM1-205ENST00000518587 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 UBR3Q6ZT12 1888 aa8.47□□□□□ -1.05
NPM1-205ENST00000518587 FBLN1P23142 703 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 TGFB2P61812 414 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.46□□□□□ -1.066e-9■□□□□ 10.2
NPM1-205ENST00000518587 PRICKLE2Q7Z3G6 844 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 SIX5Q8N196 739 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
NPM1-205ENST00000518587 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 CNTNAP4Q9C0A0 1308 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.06
NPM1-205ENST00000518587 FAM196BA6NMK8 535 aa8.45□□□□□ -1.06
NPM1-205ENST00000518587 SMTNP53814 917 aa8.45□□□□□ -1.06
NPM1-205ENST00000518587 EIF4A2Q14240 407 aaKnown RBP8.45□□□□□ -1.06
NPM1-205ENST00000518587 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
NPM1-205ENST00000518587 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
NPM1-205ENST00000518587 ZNF358Q9NW07 568 aa8.45□□□□□ -1.06
NPM1-205ENST00000518587 SENP3-EIF4A1A0A087X0R7 540 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L10C9JJH3 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L21D6R901 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 CABP4P57796 275 aa8.44□□□□□ -1.06
NPM1-205ENST00000518587 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms