RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 RUFY3Q7L099 469 aa27.93■■■□□ 2.06
SLIT3-204ENST00000518140 FBXO33Q7Z6M2 555 aa27.93■■■□□ 2.06
SLIT3-204ENST00000518140 FLAD1Q8NFF5 587 aa27.93■■■□□ 2.06
SLIT3-204ENST00000518140 UBE3CQ15386 1083 aa27.92■■■□□ 2.06
SLIT3-204ENST00000518140 CAVIN4Q5BKX8 364 aa27.92■■■□□ 2.06
SLIT3-204ENST00000518140 TTLL5Q6EMB2 1281 aa27.92■■■□□ 2.06
SLIT3-204ENST00000518140 CYP46A1Q9Y6A2 500 aa27.92■■■□□ 2.06
SLIT3-204ENST00000518140 GPAA1O43292 621 aa27.91■■■□□ 2.06
SLIT3-204ENST00000518140 PDRG1Q9NUG6 133 aa27.91■■■□□ 2.06
SLIT3-204ENST00000518140 FRAT2O75474 233 aaPredicted RBP27.91■■■□□ 2.06
SLIT3-204ENST00000518140 MMP10P09238 476 aa27.91■■■□□ 2.06
SLIT3-204ENST00000518140 VPS37DQ86XT2 251 aa27.91■■■□□ 2.06
SLIT3-204ENST00000518140 COL1A1P02452 1464 aaPredicted RBP27.91■■■□□ 2.06
SLIT3-204ENST00000518140 KLRG2A4D1S0 409 aaPredicted RBP27.9■■■□□ 2.06
SLIT3-204ENST00000518140 MAGEB6Q8N7X4 407 aa27.9■■■□□ 2.06
SLIT3-204ENST00000518140 TCEANC2Q96MN5 208 aa27.9■■■□□ 2.06
SLIT3-204ENST00000518140 ANKIB1Q9P2G1 1089 aa27.9■■■□□ 2.06
SLIT3-204ENST00000518140 RBM17Q96I25 401 aaKnown RBP27.9■■■□□ 2.06
SLIT3-204ENST00000518140 GNL3LQ9NVN8 582 aaKnown RBP27.9■■■□□ 2.06
SLIT3-204ENST00000518140 MYH7P12883 1935 aa27.89■■■□□ 2.06
SLIT3-204ENST00000518140 STOX1Q6ZVD7 989 aa27.89■■■□□ 2.06
SLIT3-204ENST00000518140 IRS2Q9Y4H2 1338 aa27.89■■■□□ 2.06
SLIT3-204ENST00000518140 MAP3K12Q12852 859 aa27.88■■■□□ 2.05
SLIT3-204ENST00000518140 CUL4AQ13619 759 aa27.88■■■□□ 2.05
SLIT3-204ENST00000518140 PSMA5P28066 241 aa27.88■■■□□ 2.05
SLIT3-204ENST00000518140 HOXA10P31260 410 aaPredicted RBP27.88■■■□□ 2.05
SLIT3-204ENST00000518140 SLC15A2Q16348 729 aa27.88■■■□□ 2.05
SLIT3-204ENST00000518140 HIBADHP31937 336 aaKnown RBP27.87■■■□□ 2.05
SLIT3-204ENST00000518140 GPR101Q96P66 508 aaPredicted RBP27.87■■■□□ 2.05
SLIT3-204ENST00000518140 FGAP02671 866 aa27.87■■■□□ 2.05
SLIT3-204ENST00000518140 GPSM2P81274 684 aa27.87■■■□□ 2.05
SLIT3-204ENST00000518140 BLOC1S2Q6QNY1 142 aa27.87■■■□□ 2.05
SLIT3-204ENST00000518140 LRP2BPQ9P2M1 347 aa27.87■■■□□ 2.05
SLIT3-204ENST00000518140 ABCF2Q9UG63 623 aa27.87■■■□□ 2.05
SLIT3-204ENST00000518140 RPS6KB1P23443 525 aa27.86■■■□□ 2.05
SLIT3-204ENST00000518140 DEFB132Q7Z7B7 95 aa27.86■■■□□ 2.05
SLIT3-204ENST00000518140 BRIP1Q9BX63 1249 aa27.86■■■□□ 2.05
SLIT3-204ENST00000518140 CIZ1Q9ULV3 898 aaPredicted RBP27.86■■■□□ 2.05
SLIT3-204ENST00000518140 LARGE1O95461 756 aa27.85■■■□□ 2.05
SLIT3-204ENST00000518140 LIMCH1Q9UPQ0 1083 aa27.85■■■□□ 2.05
SLIT3-204ENST00000518140 IL27Q8NEV9 243 aa27.85■■■□□ 2.05
SLIT3-204ENST00000518140 NEK1Q96PY6 1258 aa27.85■■■□□ 2.05
SLIT3-204ENST00000518140 RGPD3A6NKT7 1758 aaPredicted RBP27.84■■■□□ 2.05
SLIT3-204ENST00000518140 RGPD4Q7Z3J3 1758 aa27.84■■■□□ 2.05
SLIT3-204ENST00000518140 DENND2AQ9ULE3 1009 aa27.84■■■□□ 2.05
SLIT3-204ENST00000518140 PARP3Q9Y6F1 533 aa27.84■■■□□ 2.05
SLIT3-204ENST00000518140 XDHP47989 1333 aa27.84■■■□□ 2.05
SLIT3-204ENST00000518140 KRT32Q14532 448 aa27.83■■■□□ 2.05
SLIT3-204ENST00000518140 CRAMP1Q96RY5 1269 aa27.83■■■□□ 2.05
SLIT3-204ENST00000518140 STRBPQ96SI9 672 aaKnown RBP27.83■■■□□ 2.05
SLIT3-204ENST00000518140 NSFL1CQ9UNZ2 370 aaKnown RBP27.83■■■□□ 2.05
SLIT3-204ENST00000518140 LEMD3Q9Y2U8 911 aa27.83■■■□□ 2.05
SLIT3-204ENST00000518140 BBOX1O75936 387 aa27.83■■■□□ 2.05
SLIT3-204ENST00000518140 HAND2P61296 217 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 PKP1Q13835 747 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 DOCK2Q92608 1830 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 ADGRA1Q86SQ6 560 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 PDGFDQ9GZP0 370 aaPredicted RBP27.82■■■□□ 2.04
SLIT3-204ENST00000518140 STK32BQ9NY57 414 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 JAG2Q9Y219 1238 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 ANKRD31Q8N7Z5 1873 aa27.82■■■□□ 2.04
SLIT3-204ENST00000518140 E7EWF7 191 aa27.81■■■□□ 2.04
SLIT3-204ENST00000518140 MBD4O95243 580 aa27.81■■■□□ 2.04
SLIT3-204ENST00000518140 RAB3GAP1Q15042 981 aa27.81■■■□□ 2.04
SLIT3-204ENST00000518140 AIDAQ96BJ3 306 aa27.81■■■□□ 2.04
SLIT3-204ENST00000518140 ARMT1Q9H993 441 aa27.81■■■□□ 2.04
SLIT3-204ENST00000518140 RAI14Q9P0K7 980 aa27.81■■■□□ 2.04
SLIT3-204ENST00000518140 SRGNP10124 158 aa27.8■■■□□ 2.04
SLIT3-204ENST00000518140 TOB2Q14106 344 aaPredicted RBP27.8■■■□□ 2.04
SLIT3-204ENST00000518140 ZNF384Q8TF68 577 aa27.8■■■□□ 2.04
SLIT3-204ENST00000518140 CWC22Q9HCG8 908 aaKnown RBP27.8■■■□□ 2.04
SLIT3-204ENST00000518140 TPCN1Q9ULQ1 816 aa27.8■■■□□ 2.04
SLIT3-204ENST00000518140 DTNBO60941 627 aa27.8■■■□□ 2.04
SLIT3-204ENST00000518140 CHAF1AQ13111 956 aaPredicted RBP27.8■■■□□ 2.04
SLIT3-204ENST00000518140 MIGA1Q8NAN2 632 aa27.8■■■□□ 2.04
SLIT3-204ENST00000518140 TNPO1Q92973 898 aaKnown RBP27.8■■■□□ 2.04
SLIT3-204ENST00000518140 NRXN2Q9P2S2 1712 aa27.79■■■□□ 2.04
SLIT3-204ENST00000518140 CTNNA3Q9UI47 895 aa27.79■■■□□ 2.04
SLIT3-204ENST00000518140 SEMA3EO15041 775 aa27.79■■■□□ 2.04
SLIT3-204ENST00000518140 APPP05067 770 aa27.79■■■□□ 2.04
SLIT3-204ENST00000518140 CYP7A1P22680 504 aa27.79■■■□□ 2.04
SLIT3-204ENST00000518140 ME3Q16798 604 aa27.79■■■□□ 2.04
SLIT3-204ENST00000518140 INTS4Q96HW7 963 aaKnown RBP27.79■■■□□ 2.04
SLIT3-204ENST00000518140 PRKAB2O43741 272 aa27.78■■■□□ 2.04
SLIT3-204ENST00000518140 LCORLQ8N3X6 602 aa27.78■■■□□ 2.04
SLIT3-204ENST00000518140 LRRC2Q9BYS8 371 aa27.78■■■□□ 2.04
SLIT3-204ENST00000518140 UFL1O94874 794 aa27.77■■■□□ 2.04
SLIT3-204ENST00000518140 OLFM4Q6UX06 510 aa27.77■■■□□ 2.04
SLIT3-204ENST00000518140 ALDH8A1Q9H2A2 487 aaPredicted RBP27.77■■■□□ 2.04
SLIT3-204ENST00000518140 POLLQ9UGP5 575 aa27.77■■■□□ 2.04
SLIT3-204ENST00000518140 ST3GAL1Q11201 340 aa27.77■■■□□ 2.04
SLIT3-204ENST00000518140 IMMTQ16891 758 aaKnown RBP27.76■■■□□ 2.03
SLIT3-204ENST00000518140 NECAB1Q8N987 351 aa27.76■■■□□ 2.03
SLIT3-204ENST00000518140 PPEF1O14829 653 aaPredicted RBP27.76■■■□□ 2.03
SLIT3-204ENST00000518140 SF3B2Q13435 895 aaKnown RBP27.76■■■□□ 2.03
SLIT3-204ENST00000518140 NBPF3Q9H094 633 aa27.76■■■□□ 2.03
SLIT3-204ENST00000518140 EPB41L4AQ9HCS5 686 aaPredicted RBP27.76■■■□□ 2.03
SLIT3-204ENST00000518140 GGA1Q9UJY5 639 aa27.76■■■□□ 2.03
SLIT3-204ENST00000518140 NPR1P16066 1061 aa27.75■■■□□ 2.03
SLIT3-204ENST00000518140 PDE6BP35913 854 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms