RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 MARCH10Q8NA82 808 aaPredicted RBP8.87□□□□□ -0.99
CPS1-210ENST00000518043 SLC52A2Q9HAB3 445 aa8.87□□□□□ -0.99
CPS1-210ENST00000518043 LAS1LQ9Y4W2 734 aaKnown RBP8.87□□□□□ -0.99
CPS1-210ENST00000518043 NHSQ6T4R5 1651 aa8.87□□□□□ -0.99
CPS1-210ENST00000518043 CACNA1FO60840 1977 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 TJP1Q07157 1748 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 BCAR3O75815 825 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 DGAT1O75907 488 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 AVPP01185 164 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 RRP1P56182 461 aaKnown RBP8.86□□□□□ -0.99
CPS1-210ENST00000518043 CBLBQ13191 982 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 PKDCCQ504Y2 493 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 MEX3CQ5U5Q3 659 aaKnown RBP8.86□□□□□ -0.99
CPS1-210ENST00000518043 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 OSBPL3Q9H4L5 887 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 TSPYL4Q9UJ04 414 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 BCL9O00512 1426 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 RGS12O14924 1447 aa8.86□□□□□ -0.99
CPS1-210ENST00000518043 N4BP2Q86UW6 1770 aaPredicted RBP8.86□□□□□ -0.99
CPS1-210ENST00000518043 HSP90AB1P08238 724 aaKnown RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 RASA1P20936 1047 aa8.85□□□□□ -0.99
CPS1-210ENST00000518043 EIF4A1P60842 406 aaKnown RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 GTF2IP78347 998 aa8.85□□□□□ -0.99
CPS1-210ENST00000518043 CLDN10P78369 228 aa8.85□□□□□ -0.99
CPS1-210ENST00000518043 DDX54Q8TDD1 881 aaKnown RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 SSH1Q8WYL5 1049 aa8.85□□□□□ -0.99
CPS1-210ENST00000518043 IRX2Q9BZI1 471 aaPredicted RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 RGS17Q9UGC6 210 aaPredicted RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
CPS1-210ENST00000518043 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
CPS1-210ENST00000518043 ERVV-2B6SEH9 535 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 CAPN5O15484 640 aaPredicted RBP8.84□□□□□ -0.99
CPS1-210ENST00000518043 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 TEFQ10587 303 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 DDB1Q16531 1140 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 TWISTNBQ3B726 338 aaPredicted RBP8.84□□□□□ -0.99
CPS1-210ENST00000518043 Q6ZVU0 165 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 CYP2U1Q7Z449 544 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 BCL2L13Q9BXK5 485 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 TNNQ9UQP3 1299 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 CCDC9Q9Y3X0 531 aaKnown RBP8.84□□□□□ -0.99
CPS1-210ENST00000518043 BTAF1O14981 1849 aa8.84□□□□□ -0.99
CPS1-210ENST00000518043 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
CPS1-210ENST00000518043 BTBD11A6QL63 1104 aa8.83□□□□□ -1
CPS1-210ENST00000518043 EXOC5O00471 708 aa8.83□□□□□ -1
CPS1-210ENST00000518043 ELL2O00472 640 aaPredicted RBP8.83□□□□□ -1
CPS1-210ENST00000518043 PLIN1O60240 522 aa8.83□□□□□ -1
CPS1-210ENST00000518043 ADH1AP07327 375 aa8.83□□□□□ -1
CPS1-210ENST00000518043 SLC39A6Q13433 755 aa8.83□□□□□ -1
CPS1-210ENST00000518043 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
CPS1-210ENST00000518043 C20orf194Q5TEA3 1177 aa8.83□□□□□ -1
CPS1-210ENST00000518043 DNAAF2Q9NVR5 837 aaKnown RBP8.83□□□□□ -1
CPS1-210ENST00000518043 ZNF831Q5JPB2 1677 aa8.83□□□□□ -1
CPS1-210ENST00000518043 RREB1Q92766 1687 aa8.83□□□□□ -1
CPS1-210ENST00000518043 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
CPS1-210ENST00000518043 FAM196BA6NMK8 535 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L15C9J2P7 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L10C9JJH3 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L13C9JLJ4 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L12C9JPN9 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L11C9JVI0 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L21D6R901 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L18D6R9N7 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L22D6RA61 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L17D6RBQ6 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L19D6RCP7 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L20D6RJB6 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 IRX6P78412 446 aaPredicted RBP8.82□□□□□ -1
CPS1-210ENST00000518043 USP17L24Q0WX57 530 aa8.82□□□□□ -1
CPS1-210ENST00000518043 PTK7Q13308 1070 aa8.82□□□□□ -1
CPS1-210ENST00000518043 ALDH1L2Q3SY69 923 aa8.82□□□□□ -1
CPS1-210ENST00000518043 ZNF790Q6PG37 636 aa8.82□□□□□ -1
CPS1-210ENST00000518043 PIGBQ92521 554 aa8.82□□□□□ -1
CPS1-210ENST00000518043 ZNF496Q96IT1 587 aaPredicted RBP8.82□□□□□ -1
CPS1-210ENST00000518043 KIAA1024Q9UPX6 916 aa8.82□□□□□ -1
CPS1-210ENST00000518043 LY75O60449 1722 aa8.82□□□□□ -1
CPS1-210ENST00000518043 COL5A3P25940 1745 aaPredicted RBP8.82□□□□□ -1
CPS1-210ENST00000518043 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
CPS1-210ENST00000518043 TCERG1O14776 1098 aaKnown RBP8.81□□□□□ -1
CPS1-210ENST00000518043 ZBTB7BO15156 539 aaPredicted RBP8.81□□□□□ -1
CPS1-210ENST00000518043 ATG7O95352 703 aa8.81□□□□□ -1
CPS1-210ENST00000518043 HOXB7P09629 217 aa8.81□□□□□ -1
CPS1-210ENST00000518043 RLBP1P12271 317 aa8.81□□□□□ -1
CPS1-210ENST00000518043 CABP4P57796 275 aa8.81□□□□□ -1
CPS1-210ENST00000518043 CTC1Q2NKJ3 1217 aa8.81□□□□□ -1
CPS1-210ENST00000518043 PTF1AQ7RTS3 328 aa8.81□□□□□ -1
CPS1-210ENST00000518043 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
CPS1-210ENST00000518043 MEIOBQ8N635 442 aa8.81□□□□□ -1
CPS1-210ENST00000518043 ZNF428Q96B54 188 aa8.81□□□□□ -1
CPS1-210ENST00000518043 ZNF594Q96JF6 807 aaPredicted RBP8.81□□□□□ -1
CPS1-210ENST00000518043 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
CPS1-210ENST00000518043 QTRT2Q9H974 415 aaKnown RBP8.81□□□□□ -1
CPS1-210ENST00000518043 GNRH1P01148 92 aa8.8□□□□□ -1
CPS1-210ENST00000518043 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
CPS1-210ENST00000518043 POTEAQ6S8J7 498 aa8.8□□□□□ -1
CPS1-210ENST00000518043 KDF1Q8NAX2 398 aaPredicted RBP8.8□□□□□ -1
CPS1-210ENST00000518043 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
CPS1-210ENST00000518043 ATG3Q9NT62 314 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms