RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 DIXDC1Q155Q3 683 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 KRT25Q7Z3Z0 450 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 L3MBTL2Q969R5 705 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 HRASLS5Q96KN8 279 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 MUC3BQ9H195 1237 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 C19orf73Q9NVV2 129 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 GPC6Q9Y625 555 aaPredicted RBP1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 HS3ST3A1Q9Y663 406 aa1.74□□□□□ -2.13
RNU6-539P-201ENST00000516665 FSCN2O14926 492 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 TIAF1O95411 115 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 USP11P51784 963 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 ZP2Q05996 745 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 MTFR1Q15390 333 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 SH3PXD2AQ5TCZ1 1133 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 C12orf50Q8NA57 414 aaPredicted RBP1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 EZH1Q92800 747 aaPredicted RBP1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 KLHDC7BQ96G42 594 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 CCDC85AQ96PX6 553 aaPredicted RBP1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 HHIPQ96QV1 700 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 KRTAP2-2Q9BYT5 123 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 MCOLN1Q9GZU1 580 aa1.73□□□□□ -2.13
RNU6-539P-201ENST00000516665 MINK1Q8N4C8 1332 aaPredicted RBP1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 IRS2Q9Y4H2 1338 aa1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 TESPA1A2RU30 521 aaPredicted RBP1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 A6NJY4 79 aa1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 PI3P19957 117 aa1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 AFF3P51826 1226 aaKnown RBP1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 GPR162Q16538 588 aa1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 KLHL23Q8NBE8 558 aa1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 ZNF747Q9BV97 191 aa1.72□□□□□ -2.13
RNU6-539P-201ENST00000516665 DRD2P14416 443 aa1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 NLRP12P59046 1061 aa1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 TGFB2P61812 414 aa1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 DNAJC10Q8IXB1 793 aa1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 DACT3Q96B18 629 aaPredicted RBP1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 C1QTNF3Q9BXJ4 246 aa1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 NOTCH2Q04721 2471 aa1.71□□□□□ -2.14
RNU6-539P-201ENST00000516665 LTBP3Q9NS15 1303 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 MYOCOSA0A1B0GUC4 107 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 OPLAHO14841 1288 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 NFICP08651 508 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 FBXO45P0C2W1 286 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 TARSP26639 723 aaKnown RBP1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 IFI16Q16666 785 aaKnown RBP1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 ADAMTSL4Q6UY14 1074 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 BTLAQ7Z6A9 289 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 SUSD3Q96L08 255 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 SGPP1Q9BX95 441 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 VPS11Q9H270 941 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 GCM1Q9NP62 436 aa1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 LUC7LQ9NQ29 371 aaKnown RBP1.7□□□□□ -2.14
RNU6-539P-201ENST00000516665 SALL3Q9BXA9 1300 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 ZBBXA8MT70 800 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 CILPO75339 1184 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 NOS2P35228 1153 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 NRLP54845 237 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 IKZF1Q13422 519 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 FHL2Q14192 279 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 TUSC1Q2TAM9 212 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 TIGD5Q53EQ6 642 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 LCE1AQ5T7P2 110 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 DPY19L2P1Q6NXN4 242 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 OGFOD3Q6PK18 319 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 C2CD4AQ8NCU7 369 aaPredicted RBP1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 PNMA1Q8ND90 353 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 SHISA4Q96DD7 197 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 CHFRQ96EP1 664 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 IFT43Q96FT9 208 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 C8orf49Q96NF6 230 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 LACRTQ9GZZ8 138 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 HMX1Q9NP08 348 aaPredicted RBP1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 PLAGL2Q9UPG8 496 aa1.69□□□□□ -2.14
RNU6-539P-201ENST00000516665 DYNC1LI2O43237 492 aaPredicted RBP1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 GHRHP01286 108 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 RARAP10276 462 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 POU3F3P20264 500 aaPredicted RBP1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 TEAD4Q15561 434 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 NUTM2GQ5VZR2 741 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 SMG8Q8ND04 991 aaKnown RBP1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 NSUN5Q96P11 429 aaKnown RBP1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 C1GALT1Q9NS00 363 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 ANKIB1Q9P2G1 1089 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 ZNF232Q9UNY5 417 aa1.68□□□□□ -2.14
RNU6-539P-201ENST00000516665 LOC102724428A0A0B4J2F2 783 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 LOC100289279A0A1B0GTE1 492 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 PROB1E7EW31 1015 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 SEMA7AO75326 666 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 PPFIA2O75334 1257 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 RAB6AP20340 208 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 EPHA1P21709 976 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 SIK1P57059 783 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 TTLL12Q14166 644 aaPredicted RBP1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 TSGA10IPQ3SY00 556 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 UBXN11Q5T124 520 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 ZFYVE27Q5T4F4 411 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 MYSM1Q5VVJ2 828 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 SMYD5Q6GMV2 418 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 FERMT3Q86UX7 667 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 CRAMP1Q96RY5 1269 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 YIPF2Q9BWQ6 316 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms