RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 TRPA1O75762 1119 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 NEFLP07196 543 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 NFIAQ12857 509 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ZNF211Q13398 564 aaPredicted RBP5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 CLEC10AQ8IUN9 316 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FAM20CQ8IXL6 584 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 PSMG3-AS1Q96PY0 264 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 DBNDD2Q9BQY9 259 aa5.22□□□□□ -1.57
SCARNA16.2-201ENST00000516520 MEGF11A6BM72 1044 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 GAS2O43903 313 aaKnown RBP5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ICMTO60725 284 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 COBLO75128 1261 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 GRIK1P39086 918 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CD97P48960 835 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 RNF43Q68DV7 783 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 VN1R5Q7Z5H4 357 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 GLYCTKQ8IVS8 523 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ASAP3Q8TDY4 903 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 C7orf69Q9H7B7 122 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ZFYVE28Q9HCC9 887 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ANO2Q9NQ90 1003 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 BRPF3Q9ULD4 1205 aa5.21□□□□□ -1.58
SCARNA16.2-201ENST00000516520 H3BRB1 525 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 SOX1O00570 391 aaPredicted RBP5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 NDUFB5O43674 189 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 SSTR4P31391 388 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 PREPP48147 710 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 INTS5Q6P9B9 1019 aaKnown RBP5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ERICH6Q7L0X2 663 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 TRIM42Q8IWZ5 723 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 FAM83CQ9BQN1 747 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 USP26Q9BXU7 913 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 KCNF1Q9H3M0 494 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 TUT1Q9H6E5 874 aaKnown RBP5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CYP4F12Q9HCS2 524 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CCDC87Q9NVE4 849 aa5.2□□□□□ -1.58
SCARNA16.2-201ENST00000516520 HMX2A2RU54 273 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CARNS1A5YM72 827 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ESRRAP11474 423 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 BMP3P12645 472 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 PDE4CQ08493 712 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 PDE3BQ13370 1112 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 HP1BP3Q5SSJ5 553 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 PEAR1Q5VY43 1037 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 NUTM2GQ5VZR2 741 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 BEND4Q6ZU67 534 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ZDHHC13Q8IUH4 622 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 GALNT12Q8IXK2 581 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 SMG8Q8ND04 991 aaKnown RBP5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 GIMAP7Q8NHV1 300 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 SUGCTQ9HAC7 445 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 LATS2Q9NRM7 1088 aa5.19□□□□□ -1.58
SCARNA16.2-201ENST00000516520 LOC100289279A0A1B0GTE1 492 aa5.18□□□□□ -1.58
SCARNA16.2-201ENST00000516520 KIAA1324LA8MWY0 1029 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.2-201ENST00000516520 TGFB1P01137 390 aa5.18□□□□□ -1.58
SCARNA16.2-201ENST00000516520 HGSNATQ68CP4 663 aa5.18□□□□□ -1.58
SCARNA16.2-201ENST00000516520 TMPRSS13Q9BYE2 586 aa5.18□□□□□ -1.58
SCARNA16.2-201ENST00000516520 MAP4P27816 1152 aaKnown RBP5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 SERPINB4P48594 390 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 GSTM4Q03013 218 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 EXOSC6Q5RKV6 272 aaKnown RBP5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CCNJLQ8IV13 435 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 C12orf50Q8NA57 414 aaPredicted RBP5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 DDX54Q8TDD1 881 aaKnown RBP5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CITED4Q96RK1 184 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 YIPF2Q9BWQ6 316 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 CLEC4MQ9H2X3 399 aaPredicted RBP5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 LIN7BQ9HAP6 207 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 ZFYVE1Q9HBF4 777 aa5.17□□□□□ -1.58
SCARNA16.2-201ENST00000516520 A0A096LPE4 126 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 A0A1W2PP55 124 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 A0A1W2PPZ6 126 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 TIAF1O95411 115 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 POLR3DP05423 398 aaPredicted RBP5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 RXRBP28702 533 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 PCDH1Q08174 1060 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 KIAA0319Q5VV43 1072 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 SHKBP1Q8TBC3 707 aa5.16□□□□□ -1.58
SCARNA16.2-201ENST00000516520 METTL12A8MUP2 240 aa5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 CPNE3O75131 537 aaKnown RBP5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 CYP11A1P05108 521 aa5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 USP11P51784 963 aa5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 CPSF6Q16630 551 aaKnown RBP eCLIP5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 FAM129BQ96TA1 746 aa5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 TCF12Q99081 682 aa5.15□□□□□ -1.59
SCARNA16.2-201ENST00000516520 PRR19A6NJB7 356 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 SPINK2P20155 84 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 GRIA4P48058 902 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 ARHGAP4P98171 946 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 SGO2Q562F6 1265 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 MCTP1Q6DN14 999 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 PAOXQ6QHF9 649 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 NRSN2Q9GZP1 204 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 DNAJC25Q9H1X3 360 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 EHD4Q9H223 541 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 ATG3Q9NT62 314 aa5.14□□□□□ -1.59
SCARNA16.2-201ENST00000516520 FAM95CA0A1B0GW59 222 aa5.13□□□□□ -1.59
SCARNA16.2-201ENST00000516520 WDR64B1ANS9 1081 aa5.13□□□□□ -1.59
SCARNA16.2-201ENST00000516520 MED26O95402 600 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms