RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 CHD4Q14839 1912 aa11.15□□□□□ -0.62
RNU4ATAC12P-201ENST00000516460 PDS5AQ29RF7 1337 aaKnown RBP11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 WDR19Q8NEZ3 1342 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ZNF532Q9HCE3 1301 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 E7EWF7 191 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 SEMA3EO15041 775 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 STX6O43752 255 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GJB2P29033 226 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FGD1P98174 961 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ALX1Q15699 326 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 CAVIN4Q5BKX8 364 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ZNF772Q68DY9 489 aaPredicted RBP11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 Q6ZUG5 572 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 AGXT2Q9BYV1 514 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MINPP1Q9UNW1 487 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 COL4A1P02462 1669 aa11.14□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TCHHQ07283 1943 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TCRBV5S4A2TA0A5A2 114 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 NPHP1O15259 732 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 IGSF3O75054 1194 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FGAP02671 866 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GNAT2P19087 354 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 SYT1P21579 422 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 BCAMP50895 628 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ST3GAL1Q11201 340 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GTF3C6Q969F1 213 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 AIDAQ96BJ3 306 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TCEANC2Q96MN5 208 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 LLPHQ9BRT6 129 aaKnown RBP11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 LRRC4BQ9NT99 713 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 LMBRD1Q9NUN5 540 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 DDX49Q9Y6V7 483 aaKnown RBP11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TNRC6CQ9HCJ0 1690 aaKnown RBP11.13□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ZNF213O14771 459 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FOXP2O15409 715 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 PFKFB2O60825 505 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 PHF14O94880 888 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MBD3O95983 291 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 F13A1P00488 732 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 NFIXQ14938 502 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 NECAB1Q8N987 351 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 NCOA7Q8NI08 942 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 KIF3AQ9Y496 699 aa11.12□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MCM5P33992 734 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TRDNQ13061 729 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FOXD4L5Q5VV16 416 aaPredicted RBP11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TTLL5Q6EMB2 1281 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 RALYLQ86SE5 291 aaKnown RBP11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 AMIGO3Q86WK7 504 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 VPS37DQ86XT2 251 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FOXD4L4Q8WXT5 416 aaPredicted RBP11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 BRF1Q92994 677 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ZNF274Q96GC6 653 aaPredicted RBP11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 STRBPQ96SI9 672 aaKnown RBP11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 LRP2BPQ9P2M1 347 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TIAM2Q8IVF5 1701 aa11.11□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 PATL2C9JE40 543 aaKnown RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 SNAP23O00161 211 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 PRPF40AO75400 957 aaKnown RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TRIM37O94972 964 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MBD4O95243 580 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 NCLP19338 710 aaKnown RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 TM4SF1P30408 202 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 EVCP57679 992 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 ST5P78524 1137 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GRAPQ13588 217 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 LARP1BQ659C4 914 aaKnown RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 FBXO33Q7Z6M2 555 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MB21D2Q8IYB1 491 aaPredicted RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GRAPLQ8TC17 118 aaPredicted RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 NACAP1Q9BZK3 213 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 CACNA1SQ13698 1873 aa11.09□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 RGPD3A6NKT7 1758 aaPredicted RBP11.09□□□□□ -0.63
RNU4ATAC12P-201ENST00000516460 RGPD4Q7Z3J3 1758 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms