RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PI16Q6UXB8 463 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 KLHL23Q8NBE8 558 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 WNT8BQ93098 351 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 CARD10Q9BWT7 1032 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 USP21Q9UK80 565 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 WWC3Q9ULE0 1092 aa8.51□□□□□ -1.05
SMARCA5-203ENST00000515531 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
SMARCA5-203ENST00000515531 SHISA2Q6UWI4 295 aa8.5□□□□□ -1.05
SMARCA5-203ENST00000515531 VN1R5Q7Z5H4 357 aa8.5□□□□□ -1.05
SMARCA5-203ENST00000515531 C1QTNF9BB2RNN3 333 aa8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 CD68P34810 354 aaPredicted RBP8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 NRG1Q02297 640 aaPredicted RBP8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 SPRED3Q2MJR0 410 aa8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 LENG1Q96BZ8 264 aaPredicted RBP8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 OSGEPQ9NPF4 335 aa8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
SMARCA5-203ENST00000515531 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 DLL1O00548 723 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 SELPP16109 830 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 CHRNA4P43681 627 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 C19orf57Q0VDD7 668 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 DTHD1Q6ZMT9 781 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 CD163Q86VB7 1156 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 GALNT11Q8NCW6 608 aa8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 CLEC4MQ9H2X3 399 aaPredicted RBP8.48□□□□□ -1.05
SMARCA5-203ENST00000515531 SOX1O00570 391 aaPredicted RBP8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 GIPC1O14908 333 aa8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 FCGRTP55899 365 aa8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 KLHDC7BQ96G42 594 aa8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 ZFYVE1Q9HBF4 777 aa8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 ABCB6Q9NP58 842 aa8.47□□□□□ -1.05
SMARCA5-203ENST00000515531 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 ESRRAP11474 423 aaPredicted RBP8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 ITPKAP23677 461 aa8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 PTPN12Q05209 780 aaKnown RBP8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 GLIS3Q8NEA6 775 aa8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 DDX54Q8TDD1 881 aaKnown RBP8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 FRMD6Q96NE9 622 aa8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 SRCIN1Q9C0H9 1055 aa8.46□□□□□ -1.06
SMARCA5-203ENST00000515531 XRCC5P13010 732 aaKnown RBP8.45□□□□□ -1.06
SMARCA5-203ENST00000515531 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
SMARCA5-203ENST00000515531 ZNF576Q9H609 170 aa8.45□□□□□ -1.06
SMARCA5-203ENST00000515531 SOX17Q9H6I2 414 aaPredicted RBP8.45□□□□□ -1.06
SMARCA5-203ENST00000515531 AKAP2Q9Y2D5 859 aa8.45□□□□□ -1.06
SMARCA5-203ENST00000515531 MSTNO14793 375 aa8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 DDX3YO15523 660 aaKnown RBP8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 GATA4P43694 442 aa8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 NLRP12P59046 1061 aa8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 GSTM4Q03013 218 aa8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 DUOXA2Q1HG44 320 aa8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
SMARCA5-203ENST00000515531 GNA15P30679 374 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 GSTT1P30711 240 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 ADGRE1Q14246 886 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 ZNF423Q2M1K9 1284 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 RPS26P11Q5JNZ5 115 aaPredicted RBP8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 HGSNATQ68CP4 663 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 DUSP9Q99956 384 aaKnown RBP8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 OSBPL7Q9BZF2 842 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 KCNK4Q9NYG8 393 aa8.43□□□□□ -1.06
SMARCA5-203ENST00000515531 ITGB2P05107 769 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 ACAD11Q709F0 780 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 TXNRD3Q86VQ6 643 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 TMEM130Q8N3G9 435 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 SPOCK3Q9BQ16 436 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 C12orf49Q9H741 205 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 AKTIPQ9H8T0 292 aa8.42□□□□□ -1.06
SMARCA5-203ENST00000515531 B3GALT4O96024 378 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 WFDC12Q8WWY7 111 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 FAM8A1Q9UBU6 413 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
SMARCA5-203ENST00000515531 F8W735 103 aaPredicted RBP8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 TM4SF5O14894 197 aa8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 ADAM11O75078 769 aa8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 ALX3O95076 343 aa8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 CYP11A1P05108 521 aa8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 ZNF157P51786 506 aaPredicted RBP8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 BCL11AQ9H165 835 aa8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 GPN3Q9UHW5 284 aaPredicted RBP8.4□□□□□ -1.06
SMARCA5-203ENST00000515531 WISP1O95388 367 aa8.39□□□□□ -1.07
SMARCA5-203ENST00000515531 PSMD2Q13200 908 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms