RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 TAF1LQ8IZX4 1826 aa11.99□□□□□ -0.49
TPM3-221ENST00000513769 PHF14O94880 888 aa11.98□□□□□ -0.49
TPM3-221ENST00000513769 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
TPM3-221ENST00000513769 TIMM10P62072 90 aa11.98□□□□□ -0.49
TPM3-221ENST00000513769 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
TPM3-221ENST00000513769 LPIN2Q92539 896 aa11.98□□□□□ -0.49
TPM3-221ENST00000513769 ZNF594Q96JF6 807 aaPredicted RBP11.98□□□□□ -0.49
TPM3-221ENST00000513769 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
TPM3-221ENST00000513769 HAUS7Q99871 368 aa11.98□□□□□ -0.49
TPM3-221ENST00000513769 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
TPM3-221ENST00000513769 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 A0A1B0GUL7 405 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 IGSF3O75054 1194 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 GYS1P13807 737 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 METTL24Q5JXM2 366 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
TPM3-221ENST00000513769 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
TPM3-221ENST00000513769 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
TPM3-221ENST00000513769 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 UQCRFS1P1P0C7P4 283 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 MFAP1P55081 439 aaKnown RBP11.96□□□□□ -0.49
TPM3-221ENST00000513769 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.49
TPM3-221ENST00000513769 BECN1Q14457 450 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 NFIXQ14938 502 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 ANKRD18AQ8IVF6 992 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 VGLL2Q8N8G2 317 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 ESYT1Q9BSJ8 1104 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
TPM3-221ENST00000513769 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
TPM3-221ENST00000513769 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.49
TPM3-221ENST00000513769 KLRG2A4D1S0 409 aaPredicted RBP11.95□□□□□ -0.5
TPM3-221ENST00000513769 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
TPM3-221ENST00000513769 FGFR2P21802 821 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 ANAPC15P60006 121 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 UBE4AQ14139 1066 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 PUM3Q15397 648 aaKnown RBP11.95□□□□□ -0.5
TPM3-221ENST00000513769 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 GORABQ5T7V8 394 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 KIAA1211Q6ZU35 1233 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 XAGE2Q96GT9 111 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 DBNDD2Q9BQY9 259 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 SYT17Q9BSW7 474 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 BOLA2Q9H3K6 86 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.95□□□□□ -0.5
TPM3-221ENST00000513769 BCORQ6W2J9 1755 aa11.95□□□□□ -0.5
TPM3-221ENST00000513769 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 MYH3P11055 1940 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 SGSM2O43147 1006 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 BBOX1O75936 387 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 SERPINB2P05120 415 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
TPM3-221ENST00000513769 MCCP23508 829 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
TPM3-221ENST00000513769 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 DDX46Q7L014 1031 aaKnown RBP11.94□□□□□ -0.5
TPM3-221ENST00000513769 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
TPM3-221ENST00000513769 SNX21Q969T3 373 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
TPM3-221ENST00000513769 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
TPM3-221ENST00000513769 ZFYP08048 801 aaPredicted RBP11.93□□□□□ -0.5
TPM3-221ENST00000513769 SLC5A1P13866 664 aa11.93□□□□□ -0.5
TPM3-221ENST00000513769 ST5P78524 1137 aa11.93□□□□□ -0.5
TPM3-221ENST00000513769 TMED8Q6PL24 325 aaPredicted RBP11.93□□□□□ -0.5
TPM3-221ENST00000513769 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
TPM3-221ENST00000513769 MTFR1LQ9H019 292 aa11.93□□□□□ -0.5
TPM3-221ENST00000513769 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
TPM3-221ENST00000513769 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
TPM3-221ENST00000513769 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 RAD50Q92878 1312 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 NPHP1O15259 732 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 COL9A1P20849 921 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 HOXA10P31260 410 aaPredicted RBP11.92□□□□□ -0.5
TPM3-221ENST00000513769 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 TSHZ3Q63HK5 1081 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 AMIGO3Q86WK7 504 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
TPM3-221ENST00000513769 EPAS1Q99814 870 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 SEC31BQ9NQW1 1179 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 HELLSQ9NRZ9 838 aa11.92□□□□□ -0.5
TPM3-221ENST00000513769 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
TPM3-221ENST00000513769 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
TPM3-221ENST00000513769 DDX12PQ92771 950 aa11.91□□□□□ -0.5
TPM3-221ENST00000513769 RBM17Q96I25 401 aaKnown RBP11.91□□□□□ -0.5
TPM3-221ENST00000513769 CRAMP1Q96RY5 1269 aa11.91□□□□□ -0.5
TPM3-221ENST00000513769 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
TPM3-221ENST00000513769 GNL3LQ9NVN8 582 aaKnown RBP11.91□□□□□ -0.5
TPM3-221ENST00000513769 PAG1Q9NWQ8 432 aa11.91□□□□□ -0.5
TPM3-221ENST00000513769 TLR7Q9NYK1 1049 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms