RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 APBA3O96018 575 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 LDHBP07195 334 aaKnown RBP8.12□□□□□ -1.11
CHD1-210ENST00000513064 ITPKAP23677 461 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 CDC25BP30305 580 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 KLHL23Q8NBE8 558 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 GALNT11Q8NCW6 608 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 ABCB6Q9NP58 842 aa8.12□□□□□ -1.11
CHD1-210ENST00000513064 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 C9orf172C9J069 976 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 CHRNA4P43681 627 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
CHD1-210ENST00000513064 IKBKEQ14164 716 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
CHD1-210ENST00000513064 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 BCO2Q9BYV7 579 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 OSGEPQ9NPF4 335 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 SEC31BQ9NQW1 1179 aa8.11□□□□□ -1.11
CHD1-210ENST00000513064 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
CHD1-210ENST00000513064 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
CHD1-210ENST00000513064 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
CHD1-210ENST00000513064 ESRRAP11474 423 aaPredicted RBP8.1□□□□□ -1.11
CHD1-210ENST00000513064 FGD1P98174 961 aa8.1□□□□□ -1.11
CHD1-210ENST00000513064 NRG1Q02297 640 aaPredicted RBP8.1□□□□□ -1.11
CHD1-210ENST00000513064 KLHDC7BQ96G42 594 aa8.1□□□□□ -1.11
CHD1-210ENST00000513064 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
CHD1-210ENST00000513064 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
CHD1-210ENST00000513064 GIPC1O14908 333 aa8.09□□□□□ -1.11
CHD1-210ENST00000513064 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
CHD1-210ENST00000513064 NXPE4Q6UWF7 544 aa8.09□□□□□ -1.11
CHD1-210ENST00000513064 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
CHD1-210ENST00000513064 CARD10Q9BWT7 1032 aa8.09□□□□□ -1.11
CHD1-210ENST00000513064 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
CHD1-210ENST00000513064 XRCC5P13010 732 aaKnown RBP8.08□□□□□ -1.12
CHD1-210ENST00000513064 PCDH1Q08174 1060 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 SUZ12Q15022 739 aaKnown RBP8.08□□□□□ -1.12
CHD1-210ENST00000513064 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
CHD1-210ENST00000513064 HGSNATQ68CP4 663 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 TMEM130Q8N3G9 435 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 FRMD6Q96NE9 622 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 ZNF576Q9H609 170 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 KCNK4Q9NYG8 393 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
CHD1-210ENST00000513064 ARL4DP49703 201 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 ADGRE1Q14246 886 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 MBTPS1Q14703 1052 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
CHD1-210ENST00000513064 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
CHD1-210ENST00000513064 SLC7A3Q8WY07 619 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 OSBPL7Q9BZF2 842 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
CHD1-210ENST00000513064 ZFYVE1Q9HBF4 777 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 USP21Q9UK80 565 aa8.07□□□□□ -1.12
CHD1-210ENST00000513064 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
CHD1-210ENST00000513064 ADAM11O75078 769 aa8.06□□□□□ -1.12
CHD1-210ENST00000513064 B3GALT4O96024 378 aa8.06□□□□□ -1.12
CHD1-210ENST00000513064 IGHA1P01876 353 aa8.06□□□□□ -1.12
CHD1-210ENST00000513064 GNA15P30679 374 aa8.06□□□□□ -1.12
CHD1-210ENST00000513064 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
CHD1-210ENST00000513064 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
CHD1-210ENST00000513064 DDX3YO15523 660 aaKnown RBP8.05□□□□□ -1.12
CHD1-210ENST00000513064 FCGRTP55899 365 aa8.05□□□□□ -1.12
CHD1-210ENST00000513064 GPAT2Q6NUI2 795 aa8.05□□□□□ -1.12
CHD1-210ENST00000513064 DTHD1Q6ZMT9 781 aa8.05□□□□□ -1.12
CHD1-210ENST00000513064 C3orf58Q8NDZ4 430 aa8.05□□□□□ -1.12
CHD1-210ENST00000513064 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
CHD1-210ENST00000513064 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
CHD1-210ENST00000513064 MSTNO14793 375 aa8.04□□□□□ -1.12
CHD1-210ENST00000513064 PROCP04070 461 aa8.04□□□□□ -1.12
CHD1-210ENST00000513064 C12orf49Q9H741 205 aa8.04□□□□□ -1.12
CHD1-210ENST00000513064 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
CHD1-210ENST00000513064 GSTT1P30711 240 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 GATA4P43694 442 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 NLRP12P59046 1061 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 FAAP100Q0VG06 881 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.03□□□□□ -1.12
CHD1-210ENST00000513064 TXNRD3Q86VQ6 643 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 NRSN2Q9GZP1 204 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 AKTIPQ9H8T0 292 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 RNF19AQ9NV58 838 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 FAM8A1Q9UBU6 413 aa8.03□□□□□ -1.12
CHD1-210ENST00000513064 WISP1O95388 367 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
CHD1-210ENST00000513064 GSTM4Q03013 218 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 DUOXA2Q1HG44 320 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 KIAA1211Q6ZU35 1233 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 PARP2Q9UGN5 583 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 AK5Q9Y6K8 562 aa8.02□□□□□ -1.13
CHD1-210ENST00000513064 NOS3P29474 1203 aa8.01□□□□□ -1.13
CHD1-210ENST00000513064 IREB2P48200 963 aaKnown RBP8.01□□□□□ -1.13
CHD1-210ENST00000513064 DAB2P98082 770 aa8.01□□□□□ -1.13
CHD1-210ENST00000513064 Q6ZS46 218 aa8.01□□□□□ -1.13
CHD1-210ENST00000513064 DDX54Q8TDD1 881 aaKnown RBP8.01□□□□□ -1.13
CHD1-210ENST00000513064 UBASH3BQ8TF42 649 aa8.01□□□□□ -1.13
CHD1-210ENST00000513064 PPM1HQ9ULR3 514 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms